contig_metadata
10 rows where analysis = "diamond", bioproject = "PRJDB4941" and tax_phylum = "Chordata"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1284630 | 1284630 | PRJDB4941_P_NODE_27402_length_191_cov_1.830986_g26634_i0 | PRJDB4941 | 27402 | 191 | 1.830986 | 3.49718326 | Metazoa | 33208 | Chordata | Chordata | 114 | 2.57e-28 | NR | XP_042318573.1 | 8520 | g26634 | i0 | 92.1 | 66.2984293193717 | 63 | 5 | 99 | 0 | 189 | 1 | 353 | 415 | XP_042318573.1 cysteine desulfurase, mitochondrial [Sceloporus undulatus] | diamond | 12663 | 115 | 0.991304347826087 | Eukaryota | Opisthokonta | Metazoa | Chordata | Lepidosauria | Squamata | Phrynosomatidae | Sceloporus | Sceloporus undulatus | |
| 6388589 | 6388589 | PRJDB4941_P_NODE_29006_length_185_cov_1.904412_g28238_i0 | PRJDB4941 | 29006 | 185 | 1.904412 | 3.5231622 | Mammalia | 40674 | Chordata | Chordata | 122 | 1.2399999999999998e-31 | NR | ASY04854.1 | 9400 | g28238 | i0 | 86.9 | 78.1459459459459 | 61 | 8 | 98.9 | 0 | 183 | 1 | 244 | 304 | ASY04854.1 eukaryotic elongation factor 2, partial [Cynopterus sphinx] | diamond | 14457 | 122 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Chiroptera | Pteropodidae | Cynopterus | Cynopterus sphinx | |
| 27215994 | 27215994 | PRJDB4941_P_NODE_34842_length_168_cov_1.478992_g34074_i0 | PRJDB4941 | 34842 | 168 | 1.478992 | 2.48470656 | Metazoa | 33208 | Chordata | Chordata | 44.7 | 0.00271 | NR | XP_053326361.1 | 233779 | g34074 | i0 | 58.8 | 2.33928571428571 | 34 | 14 | 60.7 | 0 | 160 | 59 | 191 | 224 | XP_053326361.1 acyl-CoA-binding domain-containing protein 6 isoform X2 [Spea bombifrons] | diamond | 393 | 44.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Pelobatidae | Spea | Spea bombifrons | |
| 28794867 | 28794867 | PRJDB4941_P_NODE_13527_length_293_cov_1.643443_g12759_i0 | PRJDB4941 | 13527 | 293 | 1.643443 | 4.81528799 | Metazoa | 33208 | Chordata | Chordata | 117 | 2.37e-29 | NR | KAG2464020.1 | 55291 | g12759 | i0 | 72.9 | 47.9180887372014 | 70 | 19 | 71.7 | 0 | 291 | 82 | 285 | 354 | KAG2464020.1 RS4 protein, partial [Polypterus senegalus] | diamond | 14040 | 118 | 0.991525423728814 | Eukaryota | Opisthokonta | Metazoa | Chordata | Cladistia | Polypteriformes | Polypteridae | Polypterus | Polypterus senegalus | |
| 29457837 | 29457837 | PRJDB4941_P_NODE_15910_length_264_cov_2.074419_g15142_i0 | PRJDB4941 | 15910 | 264 | 2.074419 | 5.47646616 | Opisthokonta | 33154 | Chordata | Chordata | 102 | 5.879999999999999e-24 | NR | PKK31942.1 | 8932 | g15142 | i0 | 64.8 | 21.9659090909091 | 71 | 25 | 80.7 | 0 | 262 | 50 | 167 | 237 | PKK31942.1 IBA57 homolog, iron-sulfur cluster assembly [Columba livia] | diamond | 5799 | 103 | 0.990291262135922 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Columbiformes | Columbidae | Columba | Columba livia | |
| 29747978 | 29747978 | PRJDB4941_P_NODE_39031_length_164_cov_0.904348_g38263_i0 | PRJDB4941 | 39031 | 164 | 0.904348 | 1.48313072 | Columba livia | 8932 | Chordata | Chordata | 88.2 | 2.3e-19 | NR | XP_064900272.1 | 8932 | g38263 | i0 | 61.5 | 15.1463414634146 | 52 | 20 | 95.1 | 0 | 156 | 1 | 72 | 123 | XP_064900272.1 2-acylglycerol O-acyltransferase 2-B-like isoform X4 [Columba livia] | diamond | 2484 | 88.2 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Columbiformes | Columbidae | Columba | Columba livia | |
| 31163701 | 31163701 | PRJDB4941_P_NODE_20835_length_223_cov_2.270115_g20067_i0 | PRJDB4941 | 20835 | 223 | 2.270115 | 5.06235645 | Chordata | 7711 | Chordata | Chordata | 44.7 | 0.00589 | NR | XP_067964397.1 | 7769 | g20067 | i0 | 56.8 | 4.0627802690583 | 37 | 16 | 49.8 | 0 | 2 | 112 | 295 | 331 | XP_067964397.1 tribbles homolog 2-like [Myxine glutinosa] | diamond | 906 | 45.1 | 0.991130820399113 | Eukaryota | Opisthokonta | Metazoa | Chordata | Myxini | Myxiniformes | Myxinidae | Myxine | Myxine glutinosa | |
| 31322024 | 31322024 | PRJDB4941_P_NODE_13235_length_298_cov_1.072289_g12467_i0 | PRJDB4941 | 13235 | 298 | 1.072289 | 3.19542122 | Chordata | 7711 | Chordata | Chordata | 57.4 | 5.17e-7 | NR | XP_051880394.1 | 685728 | g12467 | i0 | 34.7 | 9.07046979865772 | 95 | 34 | 95.6 | 2 | 297 | 13 | 332 | 398 | XP_051880394.1 lethal(3)malignant brain tumor-like protein 3 isoform X4 [Pristis pectinata] | diamond | 2703 | 57.8 | 0.993079584775087 | Eukaryota | Opisthokonta | Metazoa | Chordata | Chondrichthyes | Rhinopristiformes | Pristidae | Pristis | Pristis pectinata | |
| 32587618 | 32587618 | PRJDB4941_P_NODE_39119_length_164_cov_0.904348_g38351_i0 | PRJDB4941 | 39119 | 164 | 0.904348 | 1.48313072 | Metazoa | 33208 | Chordata | Chordata | 74.7 | 6.76e-14 | NR | XP_035673662.1 | 7739 | g38351 | i0 | 63 | 4.9390243902439 | 54 | 20 | 98.8 | 0 | 3 | 164 | 621 | 674 | XP_035673662.1 importin-7-like isoform X1 [Branchiostoma floridae] | diamond | 810 | 74.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Leptocardii | Amphioxiformes | Branchiostomatidae | Branchiostoma | Branchiostoma floridae | |
| 32655998 | 32655998 | PRJDB4941_P_NODE_39540_length_163_cov_1.350877_g38772_i0 | PRJDB4941 | 39540 | 163 | 1.350877 | 2.20192951 | Sceloporus undulatus | 8520 | Chordata | Chordata | 47.8 | 2.09e-4 | NR | XP_042315801.1 | 8520 | g38772 | i0 | 33.3 | 0.773006134969325 | 42 | 28 | 77.3 | 0 | 6 | 131 | 384 | 425 | XP_042315801.1 platelet glycoprotein Ib alpha chain-like [Sceloporus undulatus] | diamond | 126 | 47.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Lepidosauria | Squamata | Phrynosomatidae | Sceloporus | Sceloporus undulatus |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;