RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJDB4470" and tax_phylum = "Negarnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJDB4470 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27727833 27727833 PRJDB4470_P_NODE_48244_length_298_cov_1.642570_g47091_i0 PRJDB4470 48244 298 1.64257 4.8948586 Amentotaxus virus 1 2977950 Viruses Viruses 90.5 6.38e-19   NR DAZ90631.1 2977950 g47091 i0 44.9 1.97315436241611 98 54 98.7 0 296 3 227 324 DAZ90631.1 TPA_asm: nucleocapsid protein [Amentotaxus virus 1] diamond 588 90.5 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Alphagymnorhavirus Alphagymnorhavirus amentotaxi
28643294 28643294 PRJDB4470_P_NODE_28527_length_434_cov_1.485714_g27387_i0 PRJDB4470 28527 434 1.485714 6.44799876 Sciadopitys virus 1_Can 2977986 Viruses Viruses 126 1.05e-31   NR DAZ90813.1 2977986 g27387 i0 40.3 0.960829493087558 139 83 96.1 0 9 425 71 209 DAZ90813.1 TPA_asm: nucleocapsid protein [Sciadopitys virus 1_Can] diamond 417 126 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Sciadopitys virus 1_Can

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;