RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJDB4470" and tax_phylum = "Lenarviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJDB4470 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24235427 24235427 PRJDB4470_P_NODE_50820_length_286_cov_1.755274_g49667_i0 PRJDB4470 50820 286 1.755274 5.02008364 Cryphonectria naterciae splipalmivirus 1 2841740 Viruses Viruses 110 2.53e-28   NR BCX55511.1 2841740 g49667 i0 60 0.996503496503496 95 37 99.7 1 2 286 59 152 BCX55511.1 hypothetical protein 1 [Cryphonectria naterciae splipalmivirus 1] diamond 285 110 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Splipalmiviridae Divipalmivirus Divipalmivirus cryphonectriae
30063969 30063969 PRJDB4470_P_NODE_18752_length_560_cov_1.407045_g17666_i0 PRJDB4470 18752 560 1.407045 7.879452 Grapevine wood holobiome associated narna-like virus 18 3398654 Viruses Viruses 82.8 2.38e-16   NR XOD45390.1 3398654 g17666 i0 39 0.728571428571429 136 76 69.1 5 518 132 6 141 XOD45390.1 HP2 [Grapevine wood holobiome associated narna-like virus 18] diamond 408 82.8 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae   Grapevine wood holobiome associated narna-like virus 18
30506460 30506460 PRJDB4470_P_NODE_113833_length_164_cov_1.808696_g112678_i0 PRJDB4470 113833 164 1.808696 2.96626144 Bremia lactucae associated narnavirus 1 2719802 Viruses Viruses 46.6 5.6e-4   NR QIP68008.1 2719802 g112678 i0 44.4 0.98780487804878 54 30 98.8 0 2 163 571 624 QIP68008.1 MAG: RNA-dependent RNA polymerase [Bremia lactucae associated narnavirus 1] diamond 162 46.6 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Bremia lactucae associated narnavirus 1

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;