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contig_metadata

18 rows where analysis = "diamond", bioproject = "PRJDB4470" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 18 ✖

tax_kingdom 1

bioproject 1

  • PRJDB4470 · 18 ✖

analysis 1

  • diamond · 18 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7359086 7359086 PRJDB4470_P_NODE_71546_length_217_cov_1.154762_g70391_i0 PRJDB4470 71546 217 1.154762 2.50583354 Anaerolineae bacterium 2052143 Bacteria Bacteria 115 5.190000000000001e-29   NR MCL6509819.1 2052143 g70391 i0 75 1.99078341013825 72 18 99.5 0 216 1 136 207 MCL6509819.1 P-type conjugative transfer ATPase TrbB [Anaerolineae bacterium] diamond 432 115 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
26779325 26779325 PRJDB4470_P_NODE_118421_length_163_cov_0.912281_g117266_i0 PRJDB4470 118421 163 0.912281 1.48701803 Caldilineae bacterium 2420332 Bacteria Bacteria 46.6 2.42e-4   NR RME56806.1 2420332 g117266 i0 51.3 0.717791411042945 39 18 69.9 1 49 162 36 74 RME56806.1 MAG: hypothetical protein D6790_14205 [Caldilineae bacterium] diamond 117 46.6 1 Bacteria   Bacillati Chloroflexota Caldilineae       Caldilineae bacterium
27089861 27089861 PRJDB4470_P_NODE_106802_length_166_cov_1.307692_g105647_i0 PRJDB4470 106802 166 1.307692 2.17076872 Bacteria 2 Bacteria Bacteria 59.3 1.33e-8   NR MBA2755258.1 2448782 g105647 i0 64.4 4.01204819277108 45 16 81.3 0 161 27 221 265 MBA2755258.1 undecaprenyl-diphosphate phosphatase [Chloroflexia bacterium] diamond 666 59.7 0.993299832495812 Bacteria   Bacillati Chloroflexota Chloroflexia       Chloroflexia bacterium
27406037 27406037 PRJDB4470_P_NODE_101643_length_168_cov_2.546218_g100488_i0 PRJDB4470 101643 168 2.546218 4.27764624 Bacteria 2 Bacteria Bacteria 97.8 5.16e-24   NR HZC78526.1 2306968 g100488 i0 75 2 56 14 100 0 1 168 98 153 HZC78526.1 RNA polymerase sigma factor [Ktedonobacterales bacterium] diamond 336 97.8 1 Bacteria   Bacillati Chloroflexota Ktedonobacteria Ktedonobacterales     Ktedonobacterales bacterium
27506643 27506643 PRJDB4470_P_NODE_110843_length_165_cov_0.896552_g109688_i0 PRJDB4470 110843 165 0.896552 1.4793108 Chloroflexota bacterium 2026724 Bacteria Bacteria 90.5 1.94e-19   NR MDF2735700.1 2026724 g109688 i0 83 3.96363636363636 53 9 96.4 0 165 7 177 229 MDF2735700.1 argS [Chloroflexota bacterium] diamond 654 90.5 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
27538110 27538110 PRJDB4470_P_NODE_111784_length_165_cov_0.879310_g110629_i0 PRJDB4470 111784 165 0.87931 1.4508615 Chloroflexota bacterium 2026724 Bacteria Bacteria 49.3 6.44e-5   NR NJD27155.1 2026724 g110629 i0 61.4 1.6 44 17 80 0 34 165 3 46 NJD27155.1 HAMP domain-containing histidine kinase [Chloroflexota bacterium] diamond 264 49.3 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
27664504 27664504 PRJDB4470_P_NODE_109144_length_166_cov_0.871795_g107989_i0 PRJDB4470 109144 166 0.871795 1.4471797 Chloroflexota bacterium 2026724 Bacteria Bacteria 95.1 3.14e-21   NR MEM7535667.1 2026724 g107989 i0 84.9 1.91566265060241 53 8 95.8 0 3 161 74 126 MEM7535667.1 preprotein translocase subunit SecY [Chloroflexota bacterium] diamond 318 95.1 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
27948514 27948514 PRJDB4470_P_NODE_66465_length_230_cov_1.127072_g65310_i0 PRJDB4470 66465 230 1.127072 2.5922656 Caldilineaceae bacterium 2614250 Bacteria Bacteria 55.1 1.37e-6   NR MFN8465799.1 2614250 g65310 i0 61.7 0.61304347826087 47 18 61.3 0 214 74 376 422 MFN8465799.1 gephyrin-like molybdotransferase Glp [Caldilineaceae bacterium] diamond 141 55.1 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
28453862 28453862 PRJDB4470_P_NODE_92846_length_179_cov_1.176923_g91691_i0 PRJDB4470 92846 179 1.176923 2.10669217 Ktedonobacteraceae bacterium 2740538 Bacteria Bacteria 47 2.52e-4   NR HVB75907.1 2740538 g91691 i0 48 0.837988826815642 50 24 80.4 1 179 36 61 110 HVB75907.1 allene oxide cyclase family protein [Ktedonobacteraceae bacterium] diamond 150 47 1 Bacteria   Bacillati Chloroflexota Ktedonobacteria Ktedonobacterales Ktedonobacteraceae   Ktedonobacteraceae bacterium
28548599 28548599 PRJDB4470_P_NODE_111067_length_165_cov_0.896552_g109912_i0 PRJDB4470 111067 165 0.896552 1.4793108 Anaerolineae bacterium 2052143 Bacteria Bacteria 61.6 9.66e-10   NR MCL6509849.1 2052143 g109912 i0 60 0.909090909090909 50 19 89.1 1 5 151 153 202 MCL6509849.1 hypothetical protein [Anaerolineae bacterium] diamond 150 61.6 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
29337817 29337817 PRJDB4470_P_NODE_93369_length_178_cov_1.558140_g92214_i0 PRJDB4470 93369 178 1.55814 2.7734892 Candidatus Limnocylindrales bacterium 2952938 Bacteria Bacteria 66.6 2.79e-11   NR HXH66383.1 2952938 g92214 i0 57.9 1.8876404494382 57 24 96.1 0 172 2 1 57 HXH66383.1 molybdopterin-dependent oxidoreductase [Candidatus Limnocylindrales bacterium] diamond 336 66.6 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria Candidatus Limnocylindrales     Candidatus Limnocylindrales bacterium
29489561 29489561 PRJDB4470_P_NODE_34550_length_381_cov_35.132530_g33400_i0 PRJDB4470 34550 381 35.13253 133.8549393 Bacillati 1783272 Bacteria Bacteria 46.6 5.87e-4   NR HCG01734.1 2026724 g33400 i0 78.6 0.496062992125984 28 6 22 0 266 183 6 33 HCG01734.1 CsbD family protein [Chloroflexota bacterium] diamond 189 46.6 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
29558674 29558674 PRJDB4470_P_NODE_96190_length_174_cov_1.632000_g95035_i0 PRJDB4470 96190 174 1.632 2.83968 Chloroflexales bacterium 2725990 Bacteria Bacteria 49.3 1.6e-5   NR MEI8165616.1 2725990 g95035 i0 52.9 0.879310344827586 51 24 87.9 0 2 154 11 61 MEI8165616.1 DUF4844 domain-containing protein [Chloroflexales bacterium] diamond 153 49.3 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales     Chloroflexales bacterium
30285632 30285632 PRJDB4470_P_NODE_106952_length_166_cov_1.085470_g105797_i0 PRJDB4470 106952 166 1.08547 1.8018802 Anaerolineae bacterium 2052143 Bacteria Bacteria 103 1.07e-27   NR MCW1969365.1 2052143 g105797 i0 96.1 0.921686746987952 51 2 92.2 0 154 2 1 51 MCW1969365.1 Fe-S cluster assembly protein IscX [Anaerolineae bacterium] diamond 153 103 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
30348955 30348955 PRJDB4470_P_NODE_116572_length_164_cov_0.878261_g115417_i0 PRJDB4470 116572 164 0.878261 1.44034804 Chloroflexota bacterium 2026724 Bacteria Bacteria 71.2 9.33e-15   NR HLQ32529.1 2026724 g115417 i0 62.3 4.84756097560976 53 20 97 0 164 6 13 65 HLQ32529.1 rhodanese-like domain-containing protein [Chloroflexota bacterium] diamond 795 71.2 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31043856 31043856 PRJDB4470_P_NODE_118155_length_163_cov_1.052632_g117000_i0 PRJDB4470 118155 163 1.052632 1.71579016 Chloroflexota bacterium 2026724 Bacteria Bacteria 69.3 3.57e-13   NR MEZ4515128.1 2026724 g117000 i0 60 2.00613496932515 55 21 99.4 1 1 162 6 60 MEZ4515128.1 coactosin family protein [Chloroflexota bacterium] diamond 327 69.3 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31075239 31075239 PRJDB4470_P_NODE_94575_length_176_cov_2.362205_g93420_i0 PRJDB4470 94575 176 2.362205 4.1574808 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 57 1.34e-7   NR MCA9830234.1 2026734 g93420 i0 52.2 0.784090909090909 46 22 78.4 0 171 34 40 85 MCA9830234.1 toprim domain-containing protein [Dehalococcoidia bacterium] diamond 138 57 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
32467170 32467170 PRJDB4470_P_NODE_124859_length_162_cov_0.893805_g123704_i0 PRJDB4470 124859 162 0.893805 1.4479641 Anaerolinea sp. 1872519 Bacteria Bacteria 73.2 8.22e-15   NR MBE2200499.1 1872519 g123704 i0 66.7 1 54 17 100 1 1 162 40 92 MBE2200499.1 hypothetical protein [Anaerolinea sp.] diamond 162 73.2 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae Anaerolinea Anaerolinea sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;