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contig_metadata

15 rows where analysis = "diamond", bioproject = "PRJDB4470" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 15 ✖

bioproject 1

  • PRJDB4470 · 15 ✖

analysis 1

  • diamond · 15 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10212236 10212236 PRJDB4470_P_NODE_32149_length_401_cov_1.465909_g31001_i0 PRJDB4470 32149 401 1.465909 5.87829509 candidate division CPR1 bacterium ADurb.Bin16 1618338 Bacteria Bacteria 131 6.249999999999999e-34   NR OQB40762.1 1852826 g31001 i0 84 1.12219451371571 75 12 56.1 0 175 399 90 164 OQB40762.1 MAG: putative transposase [candidate division CPR1 bacterium ADurb.Bin160] diamond 450 131 1 Bacteria Bacteria candidate phyla   candidate division CPR1         candidate division CPR1 bacterium ADurb.Bin160
27285349 27285349 PRJDB4470_P_NODE_97923_length_172_cov_1.292683_g96768_i0 PRJDB4470 97923 172 1.292683 2.22341476 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 104 9.31e-26   NR MDB5159905.1 2026720 g96768 i0 94.7 1.98837209302326 57 3 99.4 0 1 171 8 64 MDB5159905.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 342 104 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
27317125 27317125 PRJDB4470_P_NODE_121543_length_162_cov_1.805310_g120388_i0 PRJDB4470 121543 162 1.80531 2.9246022 Patescibacteria group bacterium 2052139 Bacteria Bacteria 84.3 1.9e-17   NR HVB33634.1 2052139 g120388 i0 73.6 0.981481481481482 53 14 98.1 0 3 161 328 380 HVB33634.1 cytochrome P450 [Patescibacteria group bacterium] diamond 159 84.3 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
27538127 27538127 PRJDB4470_P_NODE_68084_length_225_cov_2.625000_g66929_i0 PRJDB4470 68084 225 2.625 5.90625 Patescibacteria group bacterium 2052139 Bacteria Bacteria 42 0.0191   NR MEK7498903.1 2052139 g66929 i0 53.6 0.373333333333333 28 13 37.3 0 25 108 82 109 MEK7498903.1 hypothetical protein [Patescibacteria group bacterium] diamond 84 42 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
28390501 28390501 PRJDB4470_P_NODE_62426_length_242_cov_1.373057_g61271_i0 PRJDB4470 62426 242 1.373057 3.32279794 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 44.3 0.00997   NR HUY25280.1 2973664 g61271 i0 57.6 0.409090909090909 33 14 40.9 0 41 139 271 303 HUY25280.1 IS3 family transposase [Candidatus Saccharimonadales bacterium] diamond 99 44.3 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
28453860 28453860 PRJDB4470_P_NODE_87486_length_186_cov_2.211679_g86331_i0 PRJDB4470 87486 186 2.211679 4.11372294 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 112 1.48e-27   NR MBF0981099.1 2044595 g86331 i0 100 0.983870967741935 61 0 98.4 0 3 185 93 153 MBF0981099.1 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase [Candidatus Altimarinota bacterium] diamond 183 112 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
28611576 28611576 PRJDB4470_P_NODE_100007_length_169_cov_2.341667_g98852_i0 PRJDB4470 100007 169 2.341667 3.95741723 Candidatus Saccharimonadaceae bacterium 2830836 Bacteria Bacteria 53.9 1.53e-6   NR HJM04591.1 2830836 g98852 i0 68.8 0.568047337278107 32 10 56.8 0 168 73 321 352 HJM04591.1 type IV pilus assembly protein PilM [Candidatus Saccharimonadaceae bacterium] diamond 96 53.9 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae   Candidatus Saccharimonadaceae bacterium
28737861 28737861 PRJDB4470_P_NODE_111247_length_165_cov_0.896552_g110092_i0 PRJDB4470 111247 165 0.896552 1.4793108 Candidatus Mycosynbacter amalyticus 2665156 Bacteria Bacteria 114 5.47e-31   NR WP_260762453.1 2665156 g110092 i0 90.7 0.981818181818182 54 5 98.2 0 164 3 77 130 WP_260762453.1 hypothetical protein [Candidatus Mycosynbacter amalyticus] diamond 162 114 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota       Candidatus Mycosynbacter Candidatus Mycosynbacter amalyticus
28769322 28769322 PRJDB4470_P_NODE_113087_length_165_cov_0.870690_g111932_i0 PRJDB4470 113087 165 0.87069 1.4366385 Minisyncoccota bacterium 2053589 Bacteria Bacteria 98.2 3.91e-22   NR HRY49428.1 2053589 g111932 i0 92.7 3 55 4 100 0 1 165 311 365 HRY49428.1 multidrug efflux RND transporter permease subunit [Candidatus Paceibacterota bacterium] diamond 495 98.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29874620 29874620 PRJDB4470_P_NODE_91671_length_180_cov_2.320611_g90516_i0 PRJDB4470 91671 180 2.320611 4.1770998 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 41.6 0.0403   NR HKQ18883.1 2212470 g90516 i0 32.7 0.916666666666667 55 37 91.7 0 178 14 46 100 HKQ18883.1 radical SAM protein [Candidatus Eiseniibacteriota bacterium] diamond 165 41.6 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium
31163697 31163697 PRJDB4470_P_NODE_90675_length_182_cov_1.157895_g89520_i0 PRJDB4470 90675 182 1.157895 2.1073689 root 1 Root_unresolved Root_unresolved 53.1 3.5e-6   NR MBR3236515.1 2026720 g89520 i0 47.9 4.3021978021978 48 25 79.1 0 1 144 662 709 MBR3236515.1 DEAD/DEAH box helicase [Candidatus Saccharibacteria bacterium] diamond 783 53.1 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
31422886 31422886 PRJDB4470_P_NODE_109036_length_166_cov_0.871795_g107881_i0 PRJDB4470 109036 166 0.871795 1.4471797 Candidatus Babelota bacterium 2030827 Bacteria Bacteria 99.8 1.11e-22   NR MCX5924498.1 2030827 g107881 i0 83.6 0.993975903614458 55 9 99.4 0 1 165 282 336 MCX5924498.1 primosomal protein N' [Candidatus Dependentiae bacterium] diamond 165 99.8 1 Bacteria Bacteria candidate phyla             Candidatus Babelota bacterium
31707547 31707547 PRJDB4470_P_NODE_60297_length_249_cov_1.505000_g59142_i0 PRJDB4470 60297 249 1.505 3.74745 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 155 3.52e-45   NR HTR62709.1 2785449 g59142 i0 87.7 0.975903614457831 81 10 97.6 0 2 244 79 159 HTR62709.1 alpha/beta hydrolase [Candidatus Binataceae bacterium] diamond 243 155 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
32087239 32087239 PRJDB4470_P_NODE_70498_length_219_cov_2.323529_g69343_i0 PRJDB4470 70498 219 2.323529 5.08852851 Minisyncoccota bacterium 2053589 Bacteria Bacteria 94.4 1.83e-20   NR MDD4804026.1 2053589 g69343 i0 59.7 1.97260273972603 72 29 98.6 0 217 2 799 870 MDD4804026.1 anaerobic ribonucleoside-triphosphate reductase [Candidatus Paceibacterota bacterium] diamond 432 94.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32624686 32624686 PRJDB4470_P_NODE_107440_length_166_cov_0.888889_g106285_i0 PRJDB4470 107440 166 0.888889 1.47555574 Candidatus Babelota bacterium 2030827 Bacteria Bacteria 46.2 7.94e-4   NR MBS1986725.1 2030827 g106285 i0 55.3 0.849397590361446 47 18 79.5 2 165 34 445 491 MBS1986725.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [Candidatus Dependentiae bacterium] diamond 141 46.2 1 Bacteria Bacteria candidate phyla             Candidatus Babelota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;