RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJDB3785" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJDB3785 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27032338 27032338 PRJDB3785_S_NODE_27002_length_161_cov_1.339286_g26849_i0 PRJDB3785 27002 161 1.339286 2.15625046 Picornaviridae sp. 1530251 Viruses Viruses 107 1.49e-25   NR XDJ26655.1 1530251 g26849 i0 98.1 0.987577639751553 53 1 98.8 0 2 160 1679 1731 XDJ26655.1 polyprotein [Picornaviridae sp.] diamond 159 107 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Picornaviridae sp.
28327210 28327210 PRJDB3785_S_NODE_26946_length_161_cov_1.366071_g26793_i0 PRJDB3785 26946 161 1.366071 2.19937431 Picornaviridae sp. 1530251 Viruses Viruses 107 1.49e-25   NR XDJ26655.1 1530251 g26793 i0 83 0.987577639751553 53 9 98.8 0 3 161 1319 1371 XDJ26655.1 polyprotein [Picornaviridae sp.] diamond 159 107 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Picornaviridae sp.
31232919 31232919 PRJDB3785_S_NODE_24575_length_165_cov_0.879310_g24422_i0 PRJDB3785 24575 165 0.87931 1.4508615 Picornaviridae sp. 1530251 Viruses Viruses 81.6 2.47e-16   NR XDJ26655.1 1530251 g24422 i0 74.1 0.981818181818182 54 14 98.2 0 164 3 1763 1816 XDJ26655.1 polyprotein [Picornaviridae sp.] diamond 162 81.6 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Picornaviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;