RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJDB3785" and tax_phylum = "Kitrinoviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJDB3785 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27790713 27790713 PRJDB3785_S_NODE_19124_length_181_cov_1.234848_g18971_i0 PRJDB3785 19124 181 1.234848 2.23507488 brine shrimp tymo-like virus 1 2900478 Viruses Viruses 118 4.57e-29   NR UNI73998.1 2900478 g18971 i0 96.7 0.994475138121547 60 2 99.4 0 181 2 1176 1235 UNI73998.1 MAG: RNA-dependent RNA polymerase [brine shrimp tymo-like virus 1] diamond 180 118 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Tymoviridae   brine shrimp tymo-like virus 1
32813661 32813661 PRJDB3785_S_NODE_15700_length_197_cov_0.979730_g15547_i0 PRJDB3785 15700 197 0.97973 1.9300681 brine shrimp tymo-like virus 1 2900478 Viruses Viruses 134 1.21e-34   NR UNI73998.1 2900478 g15547 i0 100 0.989847715736041 65 0 99 0 196 2 244 308 UNI73998.1 MAG: RNA-dependent RNA polymerase [brine shrimp tymo-like virus 1] diamond 195 134 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Tymoviridae   brine shrimp tymo-like virus 1

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;