RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJDB14275" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJDB14275 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28674736 28674736 PRJDB14275_P_NODE_6727_length_175_cov_1.147059_g6668_i0 PRJDB14275 6727 175 1.147059 2.00735325 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 101 1.0099999999999999e-23   NR MBX9572793.1 2364082 g6668 i0 100 8.74285714285714 51 0 87.4 0 22 174 16 66 MBX9572793.1 hypothetical protein [Candidatus Obscuribacterales bacterium] diamond 1530 101 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
29053663 29053663 PRJDB14275_P_NODE_5668_length_201_cov_0.975309_g5609_i0 PRJDB14275 5668 201 0.975309 1.96037109 Candidatus Obscuribacter sp. 2711154 Bacteria Bacteria 99.4 3.4e-23   NR HND69884.1 2711154 g5609 i0 88.5 5.43283582089552 52 6 77.6 0 25 180 44 95 HND69884.1 NADPH-quinone oxidoreductase [Candidatus Obscuribacter sp.] diamond 1092 99.4 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales Candidatus Obscuribacteraceae Candidatus Obscuribacter Candidatus Obscuribacter sp.
32681609 32681609 PRJDB14275_P_NODE_3540_length_308_cov_0.966543_g3481_i0 PRJDB14275 3540 308 0.966543 2.97695244 Candidatus Obscuribacter 1906156 Bacteria Bacteria 204 3.49e-61   NR MBX3137684.1 2364082 g3481 i0 100 1.98701298701299 102 0 99.4 0 306 1 59 160 MBX3137684.1 hypothetical protein [Candidatus Obscuribacterales bacterium] diamond 612 204 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;