RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJDB14274" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJDB14274 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27759320 27759320 PRJDB14274_S_NODE_5984_length_257_cov_0.913265_g5906_i0 PRJDB14274 5984 257 0.913265 2.34709105 Picornaviridae sp. 1530251 Viruses Viruses 158 1.23e-42   NR XDJ26655.1 1530251 g5906 i0 95.3 0.992217898832685 85 4 99.2 0 1 255 533 617 XDJ26655.1 polyprotein [Picornaviridae sp.] diamond 255 158 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Picornaviridae sp.
29148650 29148650 PRJDB14274_S_NODE_3389_length_333_cov_1.639706_g3311_i0 PRJDB14274 3389 333 1.639706 5.46022098 Picornaviridae sp. 1530251 Viruses Viruses 216 2.99e-67   NR XDJ26656.1 1530251 g3311 i0 95.5 0.990990990990991 110 5 99.1 0 2 331 45 154 XDJ26656.1 capsid protein [Picornaviridae sp.] diamond 330 216 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Picornaviridae sp.
31517855 31517855 PRJDB14274_S_NODE_1896_length_442_cov_1.472441_g1818_i0 PRJDB14274 1896 442 1.4724410000000001 6.50818922 Picornaviridae sp. 1530251 Viruses Viruses 274 2.8699999999999998e-89   NR XDJ26656.1 1530251 g1818 i0 91.2 0.997737556561086 147 13 99.8 0 442 2 154 300 XDJ26656.1 capsid protein [Picornaviridae sp.] diamond 441 274 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Picornaviridae sp.
31738950 31738950 PRJDB14274_S_NODE_5497_length_267_cov_0.902913_g5419_i0 PRJDB14274 5497 267 0.902913 2.41077771 Picornaviridae sp. 1530251 Viruses Viruses 175 1.6399999999999998e-48   NR XDJ26655.1 1530251 g5419 i0 93.2 0.98876404494382 88 6 98.9 0 2 265 1573 1660 XDJ26655.1 polyprotein [Picornaviridae sp.] diamond 264 175 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Picornaviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;