RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJDB14274" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 9 ✖

tax_clade 1

bioproject 1

  • PRJDB14274 · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8582 8582 PRJDB14274_S_NODE_7221_length_236_cov_1.022857_g7143_i0 PRJDB14274 7221 236 1.022857 2.41394252 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 117 1.44e-31   NR XP_004030146.1 5932 g7143 i0 86.4 0.838983050847458 66 9 83.9 0 2 199 99 164 XP_004030146.1 hypothetical protein IMG5_167040 [Ichthyophthirius multifiliis] diamond 198 117 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
24234422 24234422 PRJDB14274_S_NODE_6000_length_256_cov_2.000000_g5922_i0 PRJDB14274 6000 256 2 5.12 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 145 1.4999999999999999e-40   NR XP_001015941.1 312017 g5922 i0 83.5 0.92578125 79 13 92.6 0 247 11 242 320 XP_001015941.1 papain family cysteine protease [Tetrahymena thermophila SB210] diamond 237 145 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
28832419 28832419 PRJDB14274_S_NODE_8408_length_219_cov_1.215190_g8330_i0 PRJDB14274 8408 219 1.21519 2.6612661 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 60.8 1.92e-9   NR KRX01081.1 266149 g8330 i0 56.1 1.72602739726027 57 25 78.1 0 2 172 36 92 KRX01081.1 hypothetical protein PPERSA_02177 [Pseudocohnilembus persalinus] diamond 378 60.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
29369287 29369287 PRJDB14274_S_NODE_4049_length_306_cov_1.310204_g3971_i0 PRJDB14274 4049 306 1.310204 4.00922424 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 81.6 1.62e-16   NR XP_004030147.1 5932 g3971 i0 36.4 1.91176470588235 99 63 97.1 0 299 3 79 177 XP_004030147.1 hypothetical protein IMG5_167050 [Ichthyophthirius multifiliis] diamond 585 81.6 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
29868624 29868624 PRJDB14274_S_NODE_6031_length_256_cov_0.907692_g5953_i0 PRJDB14274 6031 256 0.907692 2.32369152 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 111 1.1e-29   NR KAL4439091.1 5901 g5953 i0 79.7 1.5 64 13 75 0 4 195 24 87 KAL4439091.1 hypothetical protein ABPG74_008866 [Tetrahymena malaccensis] diamond 384 111 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena malaccensis
29937727 29937727 PRJDB14274_S_NODE_4271_length_299_cov_1.197479_g4193_i0 PRJDB14274 4271 299 1.197479 3.58046221 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 130 1.09e-36   NR KRX10691.1 266149 g4193 i0 62.6 0.993311036789298 99 35 99.3 1 3 299 2 98 KRX10691.1 Translation protein SH3-like domain [Pseudocohnilembus persalinus] diamond 297 130 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
30221923 30221923 PRJDB14274_S_NODE_9372_length_208_cov_1.585034_g9294_i0 PRJDB14274 9372 208 1.585034 3.29687072 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 88.6 9.28e-21   NR XP_004030095.1 5932 g9294 i0 60.9 0.995192307692308 69 26 99.5 1 208 2 14 81 XP_004030095.1 hypothetical protein IMG5_167680 [Ichthyophthirius multifiliis] diamond 207 88.6 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
32213807 32213807 PRJDB14274_S_NODE_4858_length_282_cov_1.040724_g4780_i0 PRJDB14274 4858 282 1.040724 2.93484168 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 152 1.5499999999999996e-43   NR XP_001014743.2 312017 g4780 i0 91.6 1.01063829787234 95 7 100 1 282 1 144 238 XP_001014743.2 40S ribosomal protein S3a [Tetrahymena thermophila SB210] diamond 285 152 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
32845167 32845167 PRJDB14274_S_NODE_9960_length_204_cov_1.272727_g9882_i0 PRJDB14274 9960 204 1.272727 2.59636308 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 108 2.96e-27   NR XP_001009610.1 312017 g9882 i0 78.5 0.955882352941177 65 14 95.6 0 2 196 146 210 XP_001009610.1 gamma-interferon-inducible lysosomal thiol reductase [Tetrahymena thermophila SB210] diamond 195 108 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;