RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJDB14274" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJDB14274 · 6 ✖

analysis 1

  • diamond · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27411941 27411941 PRJDB14274_S_NODE_7403_length_233_cov_1.133721_g7325_i0 PRJDB14274 7403 233 1.133721 2.64156993 Malassezia pachydermatis 77020 Fungi Fungi 45.8 0.00254   NR XP_017994028.1 77020 g7325 i0 76 0.682403433476395 25 6 32.2 0 232 158 289 313 XP_017994028.1 trm8-part of complex required for 7-methylguanosine modification [Malassezia pachydermatis] diamond 159 45.8 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia pachydermatis
29148657 29148657 PRJDB14274_S_NODE_8249_length_221_cov_1.218750_g8171_i0 PRJDB14274 8249 221 1.21875 2.6934375 Imleria badia 36058 Fungi Fungi 76.6 3.18e-14   NR KAF8557423.1 36058 g8171 i0 49.3 0.963800904977376 71 36 96.4 0 215 3 413 483 KAF8557423.1 PRMT5-domain-containing protein [Imleria badia] diamond 213 76.6 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Boletales Boletaceae Imleria Imleria badia
31201031 31201031 PRJDB14274_S_NODE_4175_length_302_cov_1.597510_g4097_i0 PRJDB14274 4175 302 1.59751 4.8244802 Mycena vulgaris 1033282 Fungi Fungi 43.9 0.0274   NR KAJ6527347.1 1033282 g4097 i0 37.8 0.894039735099338 90 43 86.4 3 301 41 212 291 KAJ6527347.1 hypothetical protein DFH09DRAFT_1414366 [Mycena vulgaris] diamond 270 43.9 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Mycenaceae Mycena Mycena vulgaris
31232882 31232882 PRJDB14274_S_NODE_6115_length_254_cov_1.331606_g6037_i0 PRJDB14274 6115 254 1.331606 3.38227924 Fomitiporia mediterranea MF3/22 694068 Fungi Fungi 43.9 0.0164   NR XP_007266028.1 694068 g6037 i0 41.8 0.649606299212598 55 31 65 1 81 245 5 58 XP_007266028.1 uncharacterized protein FOMMEDRAFT_167616 [Fomitiporia mediterranea MF3/22] diamond 165 43.9 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Hymenochaetales Hymenochaetaceae Fomitiporia Fomitiporia mediterranea
32308955 32308955 PRJDB14274_S_NODE_8939_length_212_cov_1.291391_g8861_i0 PRJDB14274 8939 212 1.291391 2.73774892 Kwoniella heveanensis BCC8398 1296120 Fungi Fungi 42.4 0.0334   NR OCF33127.1 1296120 g8861 i0 50 0.594339622641509 42 21 59.4 0 3 128 253 294 OCF33127.1 lysophosphatidate acyltransferase [Kwoniella heveanensis BCC8398] diamond 126 42.4 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cryptococcaceae Kwoniella Kwoniella heveanensis
32524572 32524572 PRJDB14274_S_NODE_7079_length_238_cov_1.367232_g7001_i0 PRJDB14274 7079 238 1.367232 3.25401216 Tulasnella 5240 Fungi Fungi 105 1.35e-25   NR KAG8919841.1 2600224 g7001 i0 64.4 5.53361344537815 73 26 92 0 19 237 106 178 KAG8919841.1 hypothetical protein FRC00_010845, partial [Tulasnella sp. 408] diamond 1317 105 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Cantharellales Tulasnellaceae Tulasnella Tulasnella sp. 408

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;