RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJDB14274" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJDB14274 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31928897 31928897 PRJDB14274_S_NODE_5637_length_264_cov_0.960591_g5559_i0 PRJDB14274 5637 264 0.960591 2.53596024 Candidatus Polarisedimenticolia bacterium 3069555 Bacteria Bacteria 95.1 7.24e-23   NR HKQ96897.1 3069555 g5559 i0 56.1 0.931818181818182 82 36 93.2 0 19 264 10 91 HKQ96897.1 formate--tetrahydrofolate ligase [Candidatus Polarisedimenticolia bacterium] diamond 246 95.1 1 Bacteria   Pseudomonadati Acidobacteriota Candidatus Polarisedimenticolia       Candidatus Polarisedimenticolia bacterium
32055441 32055441 PRJDB14274_S_NODE_7338_length_234_cov_1.202312_g7260_i0 PRJDB14274 7338 234 1.202312 2.81341008 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 82.4 3.3e-16   NR HEV3217645.1 2910147 g7260 i0 61 0.987179487179487 77 29 98.7 1 3 233 54 129 HEV3217645.1 NAD-dependent succinate-semialdehyde dehydrogenase [Vicinamibacterales bacterium] diamond 231 82.4 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;