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contig_metadata

23 rows where analysis = "diamond", bioproject = "PRJDB12578" and tax_phylum = "Streptophyta"

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tax_superkingdom 1

tax_phylum 1

  • Streptophyta · 23 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJDB12578 · 23 ✖

analysis 1

  • diamond · 23 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26588892 26588892 PRJDB12578_S_NODE_107881_length_269_cov_0.945455_g84823_i0 PRJDB12578 107881 269 0.945455 2.54327395 Gossypium raimondii 29730 Plants Plants 44.3 0.0124   NR XP_052491105.1 29730 g84823 i0 33.8 0.724907063197026 65 40 72.5 2 227 33 10 71 XP_052491105.1 uncharacterized protein LOC105791268 isoform X2 [Gossypium raimondii] diamond 195 44.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malvales Malvaceae Gossypium Gossypium raimondii
26614827 26614827 PRJDB12578_S_NODE_186481_length_173_cov_1.669355_g163423_i0 PRJDB12578 186481 173 1.669355 2.88798415 Fabaceae 3803 Plants Plants 53.1 2.54e-6   NR MED6162296.1 79078 g163423 i0 50.9 9.71098265895954 55 27 95.4 0 8 172 206 260 MED6162296.1 hypothetical protein [Stylosanthes scabra] diamond 1680 53.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Stylosanthes Stylosanthes scabra
27190298 27190298 PRJDB12578_S_NODE_158522_length_195_cov_1.417808_g135464_i0 PRJDB12578 158522 195 1.417808 2.7647256 Protea cynaroides 273540 Plants Plants 40 0.0473   NR KAJ4967851.1 273540 g135464 i0 35 0.923076923076923 60 39 92.3 0 15 194 24 83 KAJ4967851.1 hypothetical protein NE237_014552 [Protea cynaroides] diamond 180 40 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Proteales Proteaceae Protea Protea cynaroides
27285245 27285245 PRJDB12578_S_NODE_106423_length_272_cov_4.578475_g83365_i0 PRJDB12578 106423 272 4.578475 12.453452 Spirodela intermedia 51605 Plants Plants 44.7 0.0109   NR CAA2618145.1 51605 g83365 i0 33.9 0.683823529411765 62 36 62.9 1 221 51 18 79 CAA2618145.1 unnamed protein product [Spirodela intermedia] diamond 186 44.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Alismatales Araceae Spirodela Spirodela intermedia
27569482 27569482 PRJDB12578_S_NODE_183824_length_175_cov_1.285714_g160766_i0 PRJDB12578 183824 175 1.285714 2.2499995 Cichorium intybus 13427 Plants Plants 42 0.0274   NR KAI3674913.1 13427 g160766 i0 50 0.617142857142857 36 18 61.7 0 175 68 213 248 KAI3674913.1 hypothetical protein L2E82_51860 [Cichorium intybus] diamond 108 42 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Cichorium Cichorium intybus
27727750 27727750 PRJDB12578_S_NODE_164104_length_190_cov_1.468085_g141046_i0 PRJDB12578 164104 190 1.468085 2.7893615 Rubroshorea leprosula 152421 Plants Plants 44.3 0.00527   NR GKV42240.1 152421 g141046 i0 38.6 5.88947368421053 44 27 69.5 0 4 135 301 344 GKV42240.1 hypothetical protein SLEP1_g49669 [Rubroshorea leprosula] diamond 1119 44.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malvales Dipterocarpaceae Rubroshorea Rubroshorea leprosula
28200775 28200775 PRJDB12578_S_NODE_125286_length_234_cov_1.367568_g102228_i0 PRJDB12578 125286 234 1.367568 3.20010912 Nymphaea thermarum 419125 Plants Plants 42.4 0.0455   NR KAF3796524.1 419125 g102228 i0 34.8 0.846153846153846 66 39 79.5 1 191 6 402 467 KAF3796524.1 Formin-like protein 8 [Nymphaea thermarum] diamond 198 42.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Nymphaeales Nymphaeaceae Nymphaea Nymphaea thermarum
28516801 28516801 PRJDB12578_S_NODE_116027_length_251_cov_1.029703_g92969_i0 PRJDB12578 116027 251 1.029703 2.58455453 Citrus sinensis 2711 Plants Plants 92 1.89e-19   NR KAH9688532.1 2711 g92969 i0 54.2 0.99203187250996006 83 38 99.2 0 1 249 1008 1090 KAH9688532.1 retrovirus-related pol polyprotein from transposon RE1 [Citrus sinensis] diamond 249 92 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Sapindales Rutaceae Citrus Citrus sinensis
28769263 28769263 PRJDB12578_S_NODE_190407_length_171_cov_1.229508_g167349_i0 PRJDB12578 190407 171 1.229508 2.10245868 Citrus sinensis 2711 Plants Plants 59.3 2.07e-8   NR KAH9679558.1 2711 g167349 i0 61.9 3.63157894736842 42 16 73.7 0 129 4 1337 1378 KAH9679558.1 retrovirus-related pol polyprotein from transposon RE1 [Citrus sinensis] diamond 621 59.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Sapindales Rutaceae Citrus Citrus sinensis
29337728 29337728 PRJDB12578_S_NODE_77369_length_416_cov_1.694823_g54315_i0 PRJDB12578 77369 416 1.694823 7.05046368 Eutrema salsugineum 72664 Plants Plants 46.6 0.0081   NR XP_024011103.1 72664 g54315 i0 41.9 0.879807692307692 62 33 44.7 1 197 382 210 268 XP_024011103.1 zinc finger MYM-type protein 1-like [Eutrema salsugineum] diamond 366 46.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Eutrema Eutrema salsugineum
29615635 29615635 PRJDB12578_S_NODE_166490_length_188_cov_1.489209_g143432_i0 PRJDB12578 166490 188 1.489209 2.79971292 Magnoliopsida 3398 Plants Plants 65.1 2.22e-10   NR KAH9668903.1 2711 g143432 i0 52.8 24.5425531914894 53 25 84.6 0 165 7 198 250 KAH9668903.1 Integrase catalytic domain-containing protein [Citrus sinensis] diamond 4614 65.5 0.993893129770992 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Sapindales Rutaceae Citrus Citrus sinensis
29647148 29647148 PRJDB12578_S_NODE_201290_length_166_cov_1.282051_g178232_i0 PRJDB12578 201290 166 1.282051 2.12820466 Eukaryota 2759 Plants Plants 45.8 0.00101   NR MCH84180.1 97028 g178232 i0 51 2.40361445783133 51 22 88.6 2 166 20 80 129 MCH84180.1 retrovirus-related Pol polyprotein from transposon TNT 1-94 [Trifolium medium] diamond 399 45.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Trifolium Trifolium medium
30095463 30095463 PRJDB12578_S_NODE_205992_length_165_cov_0.827586_g182934_i0 PRJDB12578 205992 165 0.827586 1.3655169 Catharanthus roseus 4058 Plants Plants 41.2 0.0428   NR KAI5670849.1 4058 g182934 i0 42.9 0.763636363636364 42 24 76.4 0 38 163 140 181 KAI5670849.1 hypothetical protein M9H77_11213 [Catharanthus roseus] diamond 126 41.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Gentianales Apocynaceae Catharanthus Catharanthus roseus
30469133 30469133 PRJDB12578_S_NODE_151053_length_202_cov_1.352941_g127995_i0 PRJDB12578 151053 202 1.352941 2.73294082 Eukaryota 2759 Plants Plants 40.8 0.0485   NR XP_028068596.1 4442 g127995 i0 88.2 0.638613861386139 17 2 25.2 0 21 71 90 106 XP_028068596.1 uncharacterized protein LOC114271185 [Camellia sinensis] diamond 129 40.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ericales Theaceae Camellia Camellia sinensis
30474852 30474852 PRJDB12578_S_NODE_201993_length_166_cov_0.888889_g178935_i0 PRJDB12578 201993 166 0.888889 1.47555574 Helianthus annuus 4232 Plants Plants 71.2 1.17e-12   NR KAJ0703042.1 4232 g178935 i0 62.5 9.54216867469879 48 18 86.7 0 148 5 616 663 KAJ0703042.1 putative RNA-directed DNA polymerase [Helianthus annuus] diamond 1584 71.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Helianthus Helianthus annuus
30695810 30695810 PRJDB12578_S_NODE_125814_length_233_cov_1.532609_g102756_i0 PRJDB12578 125814 233 1.532609 3.57097897 Carex littledalei 544730 Plants Plants 43.1 0.0242   NR KAF3333877.1 544730 g102756 i0 39 0.759656652360515 59 36 76 0 228 52 23 81 KAF3333877.1 Plant transposase (Ptta/En/Spm family) [Carex littledalei] diamond 177 43.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Cyperaceae Carex Carex littledalei
30695829 30695829 PRJDB12578_S_NODE_90314_length_330_cov_1.839858_g67256_i0 PRJDB12578 90314 330 1.839858 6.0715314 Nicotiana tabacum 4097 Plants Plants 45.1 0.0145   NR XP_016511838.1 4097 g67256 i0 33 4.21818181818182 106 59 86.4 2 2 286 276 380 XP_016511838.1 uncharacterized protein, partial [Nicotiana tabacum] diamond 1392 45.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Nicotiana Nicotiana tabacum
30885474 30885474 PRJDB12578_S_NODE_148794_length_204_cov_1.845161_g125736_i0 PRJDB12578 148794 204 1.845161 3.76412844 Castanea dentata 134033 Plants Plants 40.8 0.034   NR KAL4639554.1 134033 g125736 i0 43.9 0.602941176470588 41 23 60.3 0 12 134 50 90 KAL4639554.1 hypothetical protein ACB092_03G226800 [Castanea dentata] diamond 123 40.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Fagaceae Castanea Castanea dentata
31069386 31069386 PRJDB12578_S_NODE_150095_length_203_cov_1.337662_g127037_i0 PRJDB12578 150095 203 1.337662 2.71545386 Magnoliopsida 3398 Plants Plants 46.6 9.46e-4   NR KAK1685095.1 4521 g127037 i0 52.9 5.36453201970443 34 16 50.2 0 17 118 384 417 KAK1685095.1 hypothetical protein QYE76_045943 [Lolium multiflorum] diamond 1089 47 0.991489361702128 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Lolium Lolium multiflorum
31353730 31353730 PRJDB12578_S_NODE_174796_length_182_cov_1.112782_g151738_i0 PRJDB12578 174796 182 1.112782 2.02526324 Eukaryota 2759 Plants Plants 48.1 2.07e-4   NR GEV20822.1 118510 g151738 i0 57.5 5.8021978021978 40 17 65.9 0 12 131 165 204 GEV20822.1 putative reverse transcriptase domain-containing protein [Tanacetum cinerariifolium] diamond 1056 48.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Tanacetum Tanacetum cinerariifolium
32087162 32087162 PRJDB12578_S_NODE_146478_length_207_cov_0.968354_g123420_i0 PRJDB12578 146478 207 0.968354 2.00449278 Riccia sorocarpa 122646 Plants Plants 41.2 0.0311   NR KAL3689025.1 122646 g123420 i0 46.3 0.594202898550725 41 21 58 1 183 64 22 62 KAL3689025.1 hypothetical protein R1sor_015334 [Riccia sorocarpa] diamond 123 41.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Marchantiopsida Marchantiales Ricciaceae Riccia Riccia sorocarpa
32150476 32150476 PRJDB12578_S_NODE_104138_length_279_cov_1.347826_g81080_i0 PRJDB12578 104138 279 1.347826 3.76043454 Helianthus annuus 4232 Plants Plants 85.1 1.4e-17   NR KAJ0514867.1 4232 g81080 i0 48.3 5.6989247311828 87 45 93.5 0 272 12 159 245 KAJ0514867.1 putative transcription factor and/or regulators TTF-type(Zn) family [Helianthus annuus] diamond 1590 85.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Helianthus Helianthus annuus
32870783 32870783 PRJDB12578_S_NODE_183320_length_175_cov_2.047619_g160262_i0 PRJDB12578 183320 175 2.047619 3.58333325 Eukaryota 2759 Plants Plants 73.2 2.47e-14   NR KAL0534579.1 3656 g160262 i0 54.4 18.3257142857143 57 26 97.7 0 173 3 77 133 KAL0534579.1 hypothetical protein IC582_028870 [Cucumis melo] diamond 3207 73.6 0.994565217391304 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Cucurbitales Cucurbitaceae Cucumis Cucumis melo

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;