contig_metadata
11 rows where analysis = "diamond", bioproject = "PRJDB12578" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27158500 | 27158500 | PRJDB12578_S_NODE_183062_length_175_cov_4.190476_g160004_i0 | PRJDB12578 | 183062 | 175 | 4.190476 | 7.333333 | Gaiellaceae bacterium | 2838783 | Bacteria | Bacteria | 41.6 | 0.0354 | NR | HST17223.1 | 2838783 | g160004 | i0 | 59 | 0.668571428571429 | 39 | 14 | 63.4 | 2 | 45 | 155 | 42 | 80 | HST17223.1 hypothetical protein [Gaiellaceae bacterium] | diamond | 117 | 41.6 | 1 | Bacteria | Bacillati | Actinomycetota | Thermoleophilia | Gaiellales | Gaiellaceae | Gaiellaceae bacterium | |||
| 28643222 | 28643222 | PRJDB12578_S_NODE_99307_length_294_cov_1.453061_g76249_i0 | PRJDB12578 | 99307 | 294 | 1.453061 | 4.27199934 | Quadrisphaera granulorum | 317664 | Bacteria | Bacteria | 43.5 | 0.0238 | NR | WP_211319461.1 | 317664 | g76249 | i0 | 34.3 | 1.04081632653061 | 102 | 56 | 92.9 | 4 | 15 | 287 | 6 | 107 | WP_211319461.1 NUDIX hydrolase [Quadrisphaera granulorum] | diamond | 306 | 43.5 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kineosporiales | Kineosporiaceae | Quadrisphaera | Quadrisphaera granulorum | ||
| 28731957 | 28731957 | PRJDB12578_S_NODE_148767_length_204_cov_1.987097_g125709_i0 | PRJDB12578 | 148767 | 204 | 1.987097 | 4.05367788 | Kribbella | 182639 | Bacteria | Bacteria | 43.5 | 0.0106 | NR | WP_360361916.1 | 3155122 | g125709 | i0 | 43.1 | 1.72058823529412 | 58 | 21 | 67.6 | 2 | 59 | 196 | 109 | 166 | WP_360361916.1 CDP-alcohol phosphatidyltransferase family protein [Kribbella sp. NPDC026596] | diamond | 351 | 43.5 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Kribbellaceae | Kribbella | Kribbella sp. NPDC026596 | ||
| 29300239 | 29300239 | PRJDB12578_S_NODE_130289_length_226_cov_1.587571_g107231_i0 | PRJDB12578 | 130289 | 226 | 1.587571 | 3.58791046 | Quadrisphaera | 317661 | Bacteria | Bacteria | 42.7 | 0.0283 | NR | WP_245961876.1 | 317664 | g107231 | i0 | 36.6 | 2.46902654867257 | 71 | 42 | 90.3 | 1 | 12 | 215 | 218 | 288 | WP_245961876.1 N-acetyl-gamma-glutamyl-phosphate reductase [Quadrisphaera granulorum] | diamond | 558 | 42.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kineosporiales | Kineosporiaceae | Quadrisphaera | Quadrisphaera granulorum | ||
| 29621348 | 29621348 | PRJDB12578_S_NODE_141890_length_212_cov_0.901840_g118832_i0 | PRJDB12578 | 141890 | 212 | 0.90184 | 1.9119008 | Streptomyces sp. NPDC | 1931 | Bacteria | Bacteria | 42 | 0.0417 | NR | WP_403935810.1 | 3366082 | g118832 | i0 | 33.9 | 0.834905660377358 | 59 | 37 | 80.7 | 2 | 205 | 35 | 66 | 124 | WP_403935810.1 hypothetical protein [Streptomyces sp. NPDC096310] | diamond | 177 | 42 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. NPDC096310 | ||
| 30443269 | 30443269 | PRJDB12578_S_NODE_159273_length_194_cov_1.979310_g136215_i0 | PRJDB12578 | 159273 | 194 | 1.97931 | 3.8398614 | Motilibacter peucedani | 598650 | Bacteria | Bacteria | 41.6 | 0.0489 | NR | WP_407938215.1 | 598650 | g136215 | i0 | 40 | 0.77319587628866 | 50 | 30 | 77.3 | 0 | 26 | 175 | 42 | 91 | WP_407938215.1 RNA polymerase sigma factor SigF [Motilibacter peucedani] | diamond | 150 | 41.6 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Motilibacterales | Motilibacteraceae | Motilibacter | Motilibacter peucedani | ||
| 31195163 | 31195163 | PRJDB12578_S_NODE_134215_length_221_cov_1.209302_g111157_i0 | PRJDB12578 | 134215 | 221 | 1.209302 | 2.67255742 | Streptomyces | 1883 | Bacteria | Bacteria | 42 | 0.0449 | NR | WP_093832909.1 | 1883 | g111157 | i0 | 37.9 | 1.81900452488688 | 66 | 38 | 88.2 | 2 | 202 | 8 | 71 | 134 | WP_093832909.1 MULTISPECIES: double zinc ribbon domain-containing protein [Streptomyces] | diamond | 402 | 42.4 | 0.990566037735849 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | |||
| 31391318 | 31391318 | PRJDB12578_S_NODE_107776_length_269_cov_1.422727_g84718_i0 | PRJDB12578 | 107776 | 269 | 1.422727 | 3.82713563 | Micrococcus sp. 116 | 2653154 | Bacteria | Bacteria | 43.1 | 0.00463 | NR | VWX46286.1 | 2653154 | g84718 | i0 | 42.9 | 0.546468401486989 | 49 | 21 | 49.1 | 3 | 117 | 248 | 16 | 62 | VWX46286.1 hypothetical protein MICRO116_410008 [Micrococcus sp. 116] | diamond | 147 | 43.1 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus sp. 116 | ||
| 31644077 | 31644077 | PRJDB12578_S_NODE_191897_length_170_cov_1.264463_g168839_i0 | PRJDB12578 | 191897 | 170 | 1.264463 | 2.1495871 | Atopobiaceae bacterium | 2485926 | Bacteria | Bacteria | 82.4 | 1.44e-16 | NR | MDO4405302.1 | 2485926 | g168839 | i0 | 69.6 | 11.8411764705882 | 56 | 17 | 98.8 | 0 | 170 | 3 | 61 | 116 | MDO4405302.1 bifunctional acetaldehyde-CoA/alcohol dehydrogenase [Atopobiaceae bacterium] | diamond | 2013 | 82.4 | 1 | Bacteria | Bacillati | Actinomycetota | Coriobacteriia | Coriobacteriales | Atopobiaceae | Atopobiaceae bacterium | |||
| 32435496 | 32435496 | PRJDB12578_S_NODE_120899_length_241_cov_10.078125_g97841_i0 | PRJDB12578 | 120899 | 241 | 10.078125 | 24.28828125 | Actinomycetota bacterium | 2900548 | Bacteria | Bacteria | 43.1 | 0.0248 | NR | MEN9989523.1 | 2900548 | g97841 | i0 | 42.2 | 0.560165975103734 | 45 | 25 | 56 | 1 | 223 | 89 | 216 | 259 | MEN9989523.1 hypothetical protein [Actinomycetota bacterium] | diamond | 135 | 43.1 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetota bacterium | ||||||
| 32435508 | 32435508 | PRJDB12578_S_NODE_181219_length_177_cov_1.210938_g158161_i0 | PRJDB12578 | 181219 | 177 | 1.210938 | 2.14336026 | Pseudonocardiaceae bacterium | 1873463 | Bacteria | Bacteria | 41.2 | 0.0495 | NR | HVV21965.1 | 1873463 | g158161 | i0 | 45.2 | 0.711864406779661 | 42 | 23 | 71.2 | 0 | 143 | 18 | 74 | 115 | HVV21965.1 aldehyde dehydrogenase family protein [Pseudonocardiaceae bacterium] | diamond | 126 | 41.2 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Pseudonocardiaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;