RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJDB12134" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJDB12134 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27126755 27126755 PRJDB12134_P_NODE_10662_length_279_cov_1.509709_g10527_i0 PRJDB12134 10662 279 1.509709 4.21208811 Polyporus arcularius HHB13444 1314778 Fungi Fungi 96.7 6.240000000000001e-21   NR TFK82823.1 1314778 g10527 i0 78 0.537634408602151 50 11 53.8 0 201 52 153 202 TFK82823.1 acyl-CoA dehydrogenase NM domain-like protein [Polyporus arcularius HHB13444] diamond 150 96.7 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Polyporus Polyporus arcularius
28737792 28737792 PRJDB12134_P_NODE_9987_length_289_cov_1.439815_g9852_i0 PRJDB12134 9987 289 1.439815 4.16106535 Tilletiaria anomala UBC 951 1037660 Fungi Fungi 161 1.5699999999999996e-43   NR XP_013241569.1 1037660 g9852 i0 84.2 0.986159169550173 95 15 98.6 0 3 287 630 724 XP_013241569.1 uncharacterized protein K437DRAFT_258484 [Tilletiaria anomala UBC 951] diamond 285 161 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Georgefischeriales Tilletiariaceae Tilletiaria Tilletiaria anomala
31770679 31770679 PRJDB12134_P_NODE_12857_length_250_cov_0.875706_g12722_i0 PRJDB12134 12857 250 0.875706 2.189265 Naganishia albida 100951 Fungi Fungi 166 1.5099999999999998e-45   NR KAI5455025.1 100951 g12722 i0 98.8 0.984 82 1 98.4 0 248 3 501 582 KAI5455025.1 hypothetical protein NCC49_002300 [Naganishia albida] diamond 246 166 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Filobasidiales Filobasidiaceae Naganishia Naganishia albida

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;