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contig_metadata

6 rows where analysis = "blastn" and tax_phylum = "candidate division WWE3"

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tax_superkingdom 1

tax_phylum 1

  • candidate division WWE3 · 6 ✖

tax_clade 1

analysis 1

  • blastn · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4389706 4389706 PRJNA577226_S_NODE_52024_length_173_cov_1.720588_g51085_i0 PRJNA577226 52024 173 1.720588 2.97661724 candidate division WWE3 bacterium CSP1-7 1576480 Bacteria Bacteria 115 1.8300000000000003e-21   NTclustered gi|729058634|gb|KM985816.1| 1576480 g51085 i0 79.878 0.947976878612717 164 28 93 5 1 161 127797 127636 Uncultured bacterium CSP1-7 CD WWE3 genomic sequence blastn 164 115 1 Bacteria Bacteria candidate phyla   candidate division WWE3         candidate division WWE3 bacterium CSP1-7
11493099 11493099 PRJEB11748_P_NODE_161450_length_321_cov_16.000000_g159267_i0 PRJEB11748 161450 321 16 51.36 candidate division WWE3 bacterium GW2011_GWC2_44_9 1619125 Bacteria Bacteria 401 2.5999999999999992e-107   NTclustered gi|1118703428|gb|KX123341.1| 1619125 g159267 i0 96.311 80.7102803738318 244 9 76 0 57 300 3301 3058 Candidate division WWE3 bacterium GW2011_GWC2_44_9 16S ribosomal RNA gene, partial sequence blastn 25908 401 1 Bacteria Bacteria candidate phyla   candidate division WWE3         candidate division WWE3 bacterium GW2011_GWC2_44_9
15969862 15969862 PRJNA688655_P_NODE_16653_length_241_cov_0.916667_g16588_i0 PRJNA688655 16653 241 0.916667 2.20916747 candidate division WWE3 bacterium RAAC2_WWE3_1 1394710 Bacteria Bacteria 89.8 1.65e-13   NTclustered gi|563350791|gb|CP006914.1| 1394710 g16588 i0 89.855 0.286307053941909 69 7 29 0 150 218 299013 298945 Candidate division WWE3 bacterium RAAC2_WWE3_1 chromosome, complete genome blastn 69 89.8 1 Bacteria Bacteria candidate phyla   candidate division WWE3         candidate division WWE3 bacterium RAAC2_WWE3_1
18905647 18905647 PRJNA168635_P_NODE_18555_length_187_cov_2.905797_g18139_i0 PRJNA168635 18555 187 2.905797 5.43384039 Bacteria 2 Bacteria Bacteria 58.4 3.44e-4   NTclustered gi|729058634|gb|KM985816.1| 1576480 g18139 i0 84.746 0.786096256684492 59 7 31 2 1 58 128144 128201 Uncultured bacterium CSP1-7 CD WWE3 genomic sequence blastn 147 58.4 1 Bacteria Bacteria candidate phyla   candidate division WWE3         candidate division WWE3 bacterium CSP1-7
21004876 21004876 PRJNA630162_P_NODE_58637_length_230_cov_2.801105_g57114_i0 PRJNA630162 58637 230 2.801105 6.4425415 candidate division WWE3 bacterium RAAC2_WWE3_1 1394710 Bacteria Bacteria 171 5.43e-38   NTclustered gi|662020080|ref|NR_121967.1| 1394710 g57114 i0 85.207 98.7434782608696 169 22 73 3 4 171 1243 1077 Candidate division WWE3 bacterium RAAC2_WWE3_1 23S ribosomal RNA gene, complete sequence blastn 22711 171 1 Bacteria Bacteria candidate phyla   candidate division WWE3         candidate division WWE3 bacterium RAAC2_WWE3_1
24353102 24353102 PRJEB64798_P_NODE_160960_length_183_cov_2.343284_g159194_i0 PRJEB64798 160960 183 2.343284 4.28820972 uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 500145 Bacteria Bacteria 106 1.18e-18   NTclustered gi|166157033|emb|CU367853.1| 500145 g159194 i0 77.72 2.09289617486339 193 29 99 8 2 183 34947 34758 Complete fosmid clone containing environmental DNA from Evry wastewater treatment plant digester blastn 383 106 1 Bacteria Bacteria candidate phyla   candidate division WWE3         uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;