RNAquarium Metadata Server
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contig_metadata

13 rows where analysis = "blastn" and tax_phylum = "Chaetognatha"

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tax_superkingdom 1

tax_phylum 1

  • Chaetognatha · 13 ✖

tax_kingdom 1

tax_clade 1

analysis 1

  • blastn · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1779768 1779768 PRJNA533114_P_NODE_108982_length_245_cov_1.139535_g108730_i0 PRJNA533114 108982 245 1.139535 2.79186075 Flaccisagitta enflata 366393 Chaetognatha other_Eukaryota 63.9 1.02e-5   NTclustered gi|151935668|gb|EF490819.1| 366393 g108730 i0 95 0.163265306122449 40 2 16 0 28 67 514 553 Flaccisagitta enflata posterior Hox B mRNA, partial cds blastn 40 63.9 1 Eukaryota Opisthokonta Metazoa Chaetognatha Sagittoidea Aphragmophora Sagittidae Flaccisagitta Flaccisagitta enflata
2002022 2002022 PRJNA749559_P_NODE_4282_length_208_cov_0.870748_g4212_i0 PRJNA749559 4282 208 0.870748 1.81115584 Parasagitta elegans 1562708 Chaetognatha other_Eukaryota 230 7.839999999999999e-56   NTclustered gi|14280069|gb|AF342799.1| 1562708 g4212 i0 96.429 7.98076923076923 140 4 67 1 70 208 324 185 Sagitta elegans internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 1660 230 1 Eukaryota Opisthokonta Metazoa Chaetognatha Sagittoidea Aphragmophora Sagittidae Parasagitta Parasagitta elegans
2542547 2542547 PRJNA975724_S_NODE_93682_length_228_cov_6.516129_g93501_i0 PRJNA975724 93682 228 6.516129 14.85677412 Metazoa 33208 Chaetognatha other_Eukaryota 117 7.110000000000001e-22   NTclustered gi|234203937|gb|FJ932763.1| 52888 g93501 i0 98.485 29.7324561403509 66 1 29 0 1 66 323 388 Spadella cephaloptera isolate UP-418 28S ribosomal RNA gene, partial sequence blastn 6779 117 1 Eukaryota Opisthokonta Metazoa Chaetognatha Sagittoidea Phragmophora Spadellidae Spadella Spadella cephaloptera
3195784 3195784 PRJNA674308_P_NODE_52343_length_162_cov_0.920354_g52108_i0 PRJNA674308 52343 162 0.920354 1.49097348 Spadella cephaloptera 52888 Chaetognatha other_Eukaryota 58.4 2.9e-4   NTclustered gi|157690749|tpe|BN001064.1| 52888 g52108 i0 87.755 0.302469135802469 49 6 30 0 109 157 485 437 TPA_inf: Spadella cephaloptera mRNA for putative 40S ribosomal protein S15 isoform 2 (rps15.2 gene) blastn 49 58.4 1 Eukaryota Opisthokonta Metazoa Chaetognatha Sagittoidea Phragmophora Spadellidae Spadella Spadella cephaloptera
11126242 11126242 PRJNA942138_P_NODE_31569_length_254_cov_1.701657_g31418_i0 PRJNA942138 31569 254 1.701657 4.32220878 Spadella cephaloptera 52888 Chaetognatha other_Eukaryota 172 1.6999999999999996e-38   NTclustered gi|157690683|tpe|BN001031.1| 52888 g31418 i0 79.918 6.13779527559055 244 41 94 6 5 244 233 472 TPA_inf: Spadella cephaloptera mRNA for putative 60S ribosomal protein L23 (rpl23 gene) blastn 1559 172 1 Eukaryota Opisthokonta Metazoa Chaetognatha Sagittoidea Phragmophora Spadellidae Spadella Spadella cephaloptera
18372671 18372671 PRJNA554794_P_NODE_20515_length_193_cov_0.812500_g16586_i0 PRJNA554794 20515 193 0.8125 1.568125 Spadella cephaloptera 52888 Chaetognatha other_Eukaryota 95.3 2.73e-15   NTclustered gi|157690773|tpe|BN001076.1| 52888 g16586 i0 86.364 46.3782383419689 88 10 45 2 106 192 239 153 TPA_exp: Spadella cephaloptera mRNA for putative 40S ribosomal protein S25 isoform 1 (rps25.1 gene) blastn 8951 95.3 1 Eukaryota Opisthokonta Metazoa Chaetognatha Sagittoidea Phragmophora Spadellidae Spadella Spadella cephaloptera
18746540 18746540 PRJNA914897_P_NODE_36095_length_253_cov_1.283333_g35671_i0 PRJNA914897 36095 253 1.283333 3.24683249 Flaccisagitta enflata 366393 Chaetognatha other_Eukaryota 63.9 1.06e-5   NTclustered gi|151935668|gb|EF490819.1| 366393 g35671 i0 95 0.158102766798419 40 2 16 0 134 173 514 553 Flaccisagitta enflata posterior Hox B mRNA, partial cds blastn 40 63.9 1 Eukaryota Opisthokonta Metazoa Chaetognatha Sagittoidea Aphragmophora Sagittidae Flaccisagitta Flaccisagitta enflata
19045707 19045707 PRJNA724011_P_NODE_52515_length_356_cov_1.088339_g51492_i0 PRJNA724011 52515 356 1.088339 3.87448684 Opisthokonta 33154 Chaetognatha other_Eukaryota 220 8.73e-53   NTclustered gi|158524735|gb|EU074272.1| 366441 g51492 i0 82.353 48.2808988764045 255 43 71 2 1 254 716 969 Sagitta setosa mitochondrial ATP synthase beta subunit mRNA, partial cds; nuclear gene for mitochondrial product blastn 17188 220 1 Eukaryota Opisthokonta Metazoa Chaetognatha Sagittoidea Aphragmophora Sagittidae Parasagitta Parasagitta setosa
20378536 20378536 PRJNA924320_S_NODE_5336_length_410_cov_6.659280_g5194_i0 PRJNA924320 5336 410 6.65928 27.303048 Sagitta 10230 Chaetognatha other_Eukaryota 76.8 2.34e-9   NTclustered gi|85062612|gb|DQ351890.1| 52901 g5194 i0 90 12.5048780487805 60 4 14 2 352 410 1427 1369 Sagitta bipunctata 18S small subunit ribosomal RNA gene, partial sequence blastn 5127 76.8 1 Eukaryota Opisthokonta Metazoa Chaetognatha Sagittoidea Aphragmophora Sagittidae Sagitta Sagitta bipunctata
21231651 21231651 PRJNA839281_S_NODE_15917_length_204_cov_1.103226_g15648_i0 PRJNA839281 15917 204 1.103226 2.25058104 Flaccisagitta enflata 366393 Chaetognatha other_Eukaryota 63.9 8.22e-6   NTclustered gi|151935668|gb|EF490819.1| 366393 g15648 i0 95 0.196078431372549 40 2 20 0 104 143 514 553 Flaccisagitta enflata posterior Hox B mRNA, partial cds blastn 40 63.9 1 Eukaryota Opisthokonta Metazoa Chaetognatha Sagittoidea Aphragmophora Sagittidae Flaccisagitta Flaccisagitta enflata
24548279 24548279 PRJNA1195374_P_NODE_69520_length_254_cov_1.359116_g69176_i0 PRJNA1195374 69520 254 1.359116 3.45215464 Flaccisagitta enflata 366393 Chaetognatha other_Eukaryota 63.9 1.07e-5   NTclustered gi|151935668|gb|EF490819.1| 366393 g69176 i0 95 0.15748031496063 40 2 16 0 33 72 553 514 Flaccisagitta enflata posterior Hox B mRNA, partial cds blastn 40 63.9 1 Eukaryota Opisthokonta Metazoa Chaetognatha Sagittoidea Aphragmophora Sagittidae Flaccisagitta Flaccisagitta enflata
24729214 24729214 PRJNA529924_P_NODE_2060_length_348_cov_2.448276_g1886_i0 PRJNA529924 2060 348 2.448276 8.52000048 Spadella cephaloptera 52888 Chaetognatha other_Eukaryota 178 5.2099999999999986e-40   NTclustered gi|157690683|tpe|BN001031.1| 52888 g1886 i0 80.328 4.42528735632184 244 40 69 6 8 247 233 472 TPA_inf: Spadella cephaloptera mRNA for putative 60S ribosomal protein L23 (rpl23 gene) blastn 1540 178 1 Eukaryota Opisthokonta Metazoa Chaetognatha Sagittoidea Phragmophora Spadellidae Spadella Spadella cephaloptera
24760273 24760273 PRJNA556992_P_NODE_866100_length_242_cov_3.562130_g863910_i0 PRJNA556992 866100 242 3.56213 8.6203546 Parasagitta setosa 366441 Chaetognatha other_Eukaryota 215 2.63e-51   NTclustered gi|158524735|gb|EU074272.1| 366441 g863910 i0 82.716 55.7148760330578 243 40 100 2 1 242 724 965 Sagitta setosa mitochondrial ATP synthase beta subunit mRNA, partial cds; nuclear gene for mitochondrial product blastn 13483 215 1 Eukaryota Opisthokonta Metazoa Chaetognatha Sagittoidea Aphragmophora Sagittidae Parasagitta Parasagitta setosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;