RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn" and tax_phylum = "Candidatus Microgenomatota"

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bioproject 3

tax_superkingdom 1

tax_phylum 1

  • Candidatus Microgenomatota · 5 ✖

tax_clade 1

analysis 1

  • blastn · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7664937 7664937 PRJEB10140_P_NODE_26827_length_1234_cov_12.195781_g12114_i1 PRJEB10140 26827 1234 12.195781 150.49593754 uncultured Microgenomates bacterium Rifle_16ft_4_minimus_37633 1665114 Bacteria Bacteria 56.5 0.01   NTclustered gi|874575139|gb|KT006999.1| 1665114 g12114 i1 100 0.0243111831442464 30 0 2 0 863 892 6987 7016 Uncultured Microgenomates bacterium Rifle_16ft_4_minimus_37633 genomic sequence blastn 30 56.5 1 Bacteria Bacteria candidate phyla   Candidatus Microgenomatota         uncultured Microgenomates bacterium Rifle_16ft_4_minimus_37633
8940050 8940050 PRJEB10140_P_NODE_32028_length_1073_cov_13.693359_g12114_i2 PRJEB10140 32028 1073 13.693359 146.92974207 uncultured Microgenomates bacterium Rifle_16ft_4_minimus_37633 1665114 Bacteria Bacteria 56.5 0.008   NTclustered gi|874575139|gb|KT006999.1| 1665114 g12114 i2 100 0.0279589934762349 30 0 3 0 702 731 6987 7016 Uncultured Microgenomates bacterium Rifle_16ft_4_minimus_37633 genomic sequence blastn 30 56.5 1 Bacteria Bacteria candidate phyla   Candidatus Microgenomatota         uncultured Microgenomates bacterium Rifle_16ft_4_minimus_37633
9921233 9921233 PRJEB64798_P_NODE_176828_length_176_cov_0.834646_g175062_i0 PRJEB64798 176828 176 0.834646 1.46897696 Bacteria 2 Bacteria Bacteria 257 2.9300000000000003e-64   NTclustered gi|2967784|gb|AF050608.1| 74258 g175062 i0 97.987 88.1647727272727 149 2 99 1 27 174 95 243 Uncultured eubacterium WCHA1-16 16S ribosomal RNA gene, partial sequence blastn 15517 257 1 Bacteria Bacteria candidate phyla   Candidatus Microgenomatota         uncultured eubacterium WCHA1-16
13905290 13905290 PRJNA630162_P_NODE_19551_length_419_cov_2.940541_g18038_i0 PRJNA630162 19551 419 2.940541 12.32086679 Bacillati 1783272 Bacteria Bacteria 713 0   NTclustered gi|2967783|gb|AF050607.1| 74257 g18038 i0 97.821 86.3961813842482 413 9 99 0 7 419 503 915 Uncultured eubacterium WCHA1-11 16S ribosomal RNA gene, partial sequence blastn 36200 719 0.991655076495132 Bacteria Bacteria candidate phyla   Candidatus Microgenomatota         uncultured eubacterium WCHA1-11
24238028 24238028 PRJEB10140_P_NODE_20820_length_1470_cov_12.080225_g12114_i0 PRJEB10140 20820 1470 12.080225 177.5793075 uncultured Microgenomates bacterium Rifle_16ft_4_minimus_37633 1665114 Bacteria Bacteria 56.5 0.012   NTclustered gi|874575139|gb|KT006999.1| 1665114 g12114 i0 100 0.0204081632653061 30 0 2 0 1099 1128 6987 7016 Uncultured Microgenomates bacterium Rifle_16ft_4_minimus_37633 genomic sequence blastn 30 56.5 1 Bacteria Bacteria candidate phyla   Candidatus Microgenomatota         uncultured Microgenomates bacterium Rifle_16ft_4_minimus_37633

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;