RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn" and tax_phylum = "Candidatus Kerfeldiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kerfeldiibacteriota · 4 ✖

tax_clade 1

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
602037 602037 PRJNA630162_P_NODE_22081_length_391_cov_2.880117_g20563_i0 PRJNA630162 22081 391 2.880117 11.26125747 Candidatus Kerfeldbacteria bacterium 2053565 Bacteria Bacteria 241 7.430000000000001e-59   NTclustered gi|2916314490|gb|CP181398.1| 2053565 g20563 i0 80.115 274.127877237852 347 50 86 15 55 391 1043138 1043475 MAG: Candidatus Kerfeldbacteria bacterium isolate MKparc4 chromosome blastn 107184 241 1 Bacteria Bacteria candidate phyla   Candidatus Kerfeldiibacteriota         Candidatus Kerfeldbacteria bacterium
4118162 4118162 PRJNA1148190_P_NODE_146544_length_434_cov_1.947368_g135378_i0 PRJNA1148190 146544 434 1.947368 8.45157712 Candidatus Kerfeldbacteria bacterium 2053565 Bacteria Bacteria 110 2.45e-19   NTclustered gi|2916314490|gb|CP181398.1| 2053565 g135378 i0 93.243 19.7350230414747 74 5 17 0 117 190 839748 839675 MAG: Candidatus Kerfeldbacteria bacterium isolate MKparc4 chromosome blastn 8565 110 1 Bacteria Bacteria candidate phyla   Candidatus Kerfeldiibacteriota         Candidatus Kerfeldbacteria bacterium
17979241 17979241 PRJEB64798_P_NODE_189475_length_170_cov_8.760331_g187709_i0 PRJEB64798 189475 170 8.760331 14.8925627 Candidatus Kerfeldbacteria bacterium 2053565 Bacteria Bacteria 78.7 2.35e-10   NTclustered gi|2916314490|gb|CP181398.1| 2053565 g187709 i0 87.143 6.06470588235294 70 8 41 1 96 164 1042476 1042407 MAG: Candidatus Kerfeldbacteria bacterium isolate MKparc4 chromosome blastn 1031 78.7 1 Bacteria Bacteria candidate phyla   Candidatus Kerfeldiibacteriota         Candidatus Kerfeldbacteria bacterium
19387549 19387549 PRJNA1120060_P_NODE_330796_length_408_cov_5.373134_g313570_i0 PRJNA1120060 330796 408 5.373134 21.92238672 Candidatus Kerfeldbacteria bacterium 2053565 Bacteria Bacteria 52.8 0.039   NTclustered gi|2916314490|gb|CP181398.1| 2053565 g313570 i0 100 0.0686274509803922 28 0 7 0 157 184 963869 963842 MAG: Candidatus Kerfeldbacteria bacterium isolate MKparc4 chromosome blastn 28 52.8 1 Bacteria Bacteria candidate phyla   Candidatus Kerfeldiibacteriota         Candidatus Kerfeldbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;