RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn" and tax_phylum = "Candidatus Joergenseniibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Joergenseniibacteriota · 1 ✖

tax_clade 1

bioproject 1

analysis 1

  • blastn · 1 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20717287 20717287 PRJNA1174207_P_NODE_42957_length_229_cov_2.397436_g42428_i0 PRJNA1174207 42957 229 2.397436 5.49012844 Candidatus Jorgensenbacteria bacterium GW2011_GWA2_45_9 1618663 Bacteria Bacteria 307 3.95e-79   NTclustered gi|1118703468|gb|KX123381.1| 1618663 g42428 i0 90.909 101.170305676856 231 18 100 2 1 229 2334 2105 Candidatus Jorgensenbacteria bacterium GW2011_GWA2_45_9 16S ribosomal RNA gene, partial sequence blastn 23168 307 1 Bacteria Bacteria candidate phyla   Candidatus Joergenseniibacteriota         Candidatus Jorgensenbacteria bacterium GW2011_GWA2_45_9

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;