RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where analysis = "blastn", tax_kingdom = "Pseudomonadati" and tax_phylum = "Thermosulfidibacterota"

✎ View and edit SQL

This data as json, CSV (advanced)

bioproject 3

tax_superkingdom 1

tax_phylum 1

  • Thermosulfidibacterota · 3 ✖

tax_kingdom 1

  • Pseudomonadati · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1994616 1994616 PRJNA734348_P_NODE_60902_length_279_cov_0.873786_g60205_i0 PRJNA734348 60902 279 0.873786 2.43786294 Thermosulfidibacter takaii 412593 Bacteria Bacteria 171 6.799999999999999e-38   NTclustered gi|965596756|dbj|AP013035.1| 1298851 g60205 i0 79.681 502.867383512545 251 40 87 10 12 254 1425907 1426154 Thermosulfidibacter takaii ABI70S6 DNA, complete genome blastn 140300 171 1 Bacteria   Pseudomonadati Thermosulfidibacterota Thermosulfidibacteria Thermosulfidibacterales Thermosulfidibacteraceae Thermosulfidibacter Thermosulfidibacter takaii
3146405 3146405 PRJNA615351_P_NODE_152203_length_187_cov_1.282895_g138103_i0 PRJNA615351 152203 187 1.282895 2.39901365 Thermosulfidibacter takaii 412593 Bacteria Bacteria 134 5.56e-27   NTclustered gi|965596756|dbj|AP013035.1| 1298851 g138103 i0 87.179 1.4331550802139 117 15 63 0 55 171 1643396 1643512 Thermosulfidibacter takaii ABI70S6 DNA, complete genome blastn 268 134 1 Bacteria   Pseudomonadati Thermosulfidibacterota Thermosulfidibacteria Thermosulfidibacterales Thermosulfidibacteraceae Thermosulfidibacter Thermosulfidibacter takaii
3165129 3165129 PRJNA641707_P_NODE_251843_length_181_cov_8.174242_g249180_i0 PRJNA641707 251843 181 8.174242 14.79537802 Thermosulfidibacter takaii 412593 Bacteria Bacteria 141 3.19e-29   NTclustered gi|965596756|dbj|AP013035.1| 1298851 g249180 i0 83.648 149.707182320442 159 16 85 9 23 176 1424189 1424342 Thermosulfidibacter takaii ABI70S6 DNA, complete genome blastn 27097 141 1 Bacteria   Pseudomonadati Thermosulfidibacterota Thermosulfidibacteria Thermosulfidibacterales Thermosulfidibacteraceae Thermosulfidibacter Thermosulfidibacter takaii

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;