RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", tax_kingdom = "Abadenavirae" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

tax_kingdom 1

  • Abadenavirae · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16858771 16858771 PRJNA1126198_P_NODE_380274_length_251_cov_0.865169_g379553_i0 PRJNA1126198 380274 251 0.865169 2.17157419 Corticoviridae sp. 2832474 Viruses Viruses 425 1.16e-114   NTclustered gi|2052233068|tpg|BK056760.1| 2832474 g379553 i0 97.581 3.98804780876494 248 6 99 0 4 251 2368 2121 MAG TPA_asm: Corticoviridae sp. isolate ct7Dl11, partial genome blastn 1001 425 1 Viruses   Abadenavirae Produgelaviricota Belvinaviricetes Vinavirales Corticoviridae   Corticoviridae sp.
19289368 19289368 PRJNA1028258_P_NODE_142396_length_233_cov_0.865854_g141833_i0 PRJNA1028258 142396 233 0.865854 2.01743982 Corticoviridae sp. 2832474 Viruses Viruses 348 2.37e-91   NTclustered gi|2052233068|tpg|BK056760.1| 2832474 g141833 i0 93.562 5.00858369098712 233 15 100 0 1 233 7148 7380 MAG TPA_asm: Corticoviridae sp. isolate ct7Dl11, partial genome blastn 1167 348 1 Viruses   Abadenavirae Produgelaviricota Belvinaviricetes Vinavirales Corticoviridae   Corticoviridae sp.
25947057 25947057 PRJNA1233465b_S_NODE_29004_length_427_cov_7.492063_g27335_i0 PRJNA1233465 29004 427 7.492063 31.99110901 Corticoviridae sp. 2832474 Viruses Viruses 682 0   NTclustered gi|2052233068|tpg|BK056760.1| 2832474 g27335 i0 95.745 5.59484777517564 423 18 99 0 5 427 7189 7611 MAG TPA_asm: Corticoviridae sp. isolate ct7Dl11, partial genome blastn 2389 682 1 Viruses   Abadenavirae Produgelaviricota Belvinaviricetes Vinavirales Corticoviridae   Corticoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;