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contig_metadata

12 rows where analysis = "blastn" and tax_clade = "SAR92 clade"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • SAR92 clade · 12 ✖

analysis 1

  • blastn · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
614910 614910 PRJNA641707_P_NODE_282561_length_169_cov_6.091667_g279898_i0 PRJNA641707 282561 169 6.091667 10.29491723 SAR92 clade bacterium H455 2974818 Bacteria Bacteria 89.8 1.08e-13   NTclustered gi|2293304500|gb|CP103416.1| 2974818 g279898 i0 88.889 0.42603550295858 72 8 43 0 2 73 64280 64351 SAR92 clade bacterium H455 chromosome blastn 72 89.8 1 Bacteria SAR92 clade Pseudomonadati Pseudomonadota Gammaproteobacteria Cellvibrionales Porticoccaceae   SAR92 clade bacterium H455
1073509 1073509 PRJNA371613_P_NODE_2021_length_418_cov_84.015748_g1846_i0 PRJNA371613 2021 418 84.015748 351.18582664 Cellvibrionales 1706369 Bacteria Bacteria 425 2.06e-114   NTclustered gi|14334237|gb|AY033301.1| 159788 g1846 i0 85.308 289.978468899522 422 50 99 11 1 417 2008 2422 Uncultured gamma proteobacterium MB11B11 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 121211 425 1 Bacteria SAR92 clade Pseudomonadati Pseudomonadota Gammaproteobacteria Cellvibrionales Porticoccaceae   uncultured gamma proteobacterium MB11B11
2037911 2037911 PRJNA781427_P_NODE_90842_length_244_cov_0.900585_g89958_i0 PRJNA781427 90842 244 0.900585 2.1974274 SAR92 clade bacterium H455 2974818 Bacteria Bacteria 401 1.8999999999999998e-107   NTclustered gi|2293304500|gb|CP103416.1| 2974818 g89958 i0 96.311 1.86065573770492 244 9 100 0 1 244 839540 839783 SAR92 clade bacterium H455 chromosome blastn 454 401 1 Bacteria SAR92 clade Pseudomonadati Pseudomonadota Gammaproteobacteria Cellvibrionales Porticoccaceae   SAR92 clade bacterium H455
2198828 2198828 PRJNA944150_P_NODE_18382_length_206_cov_2.394904_g18131_i0 PRJNA944150 18382 206 2.394904 4.93350224 SAR92 clade bacterium H455 2974818 Bacteria Bacteria 165 2.22e-36   NTclustered gi|2293304500|gb|CP103416.1| 2974818 g18131 i0 81.373 13.4757281553398 204 36 99 2 4 206 1946589 1946387 SAR92 clade bacterium H455 chromosome blastn 2776 165 1 Bacteria SAR92 clade Pseudomonadati Pseudomonadota Gammaproteobacteria Cellvibrionales Porticoccaceae   SAR92 clade bacterium H455
6015162 6015162 PRJNA937226_S_NODE_2325_length_405_cov_12.134831_g2198_i0 PRJNA937226 2325 405 12.134831 49.14606555 uncultured gamma proteobacterium MB11B11 159788 Bacteria Bacteria 429 1.5399999999999996e-115   NTclustered gi|14334237|gb|AY033301.1| 159788 g2198 i0 86.07 203.804938271605 402 53 99 3 6 405 2422 2022 Uncultured gamma proteobacterium MB11B11 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 82541 429 1 Bacteria SAR92 clade Pseudomonadati Pseudomonadota Gammaproteobacteria Cellvibrionales Porticoccaceae   uncultured gamma proteobacterium MB11B11
11534879 11534879 PRJEB36940_P_NODE_11290_length_262_cov_1.666667_g11161_i0 PRJEB36940 11290 262 1.666667 4.36666754 SAR92 clade bacterium H455 2974818 Bacteria Bacteria 370 5.81e-98   NTclustered gi|2293304500|gb|CP103416.1| 2974818 g11161 i0 92.308 342.935114503817 260 20 99 0 3 262 2636444 2636703 SAR92 clade bacterium H455 chromosome blastn 89849 370 1 Bacteria SAR92 clade Pseudomonadati Pseudomonadota Gammaproteobacteria Cellvibrionales Porticoccaceae   SAR92 clade bacterium H455
11755143 11755143 PRJNA1120771_S_NODE_24030_length_243_cov_2.820000_g23630_i0 PRJNA1120771 24030 243 2.82 6.8526 uncultured gamma proteobacterium MB11B11 159788 Bacteria Bacteria 239 1.57e-58   NTclustered gi|14334237|gb|AY033301.1| 159788 g23630 i0 85.47 309.765432098765 234 29 96 4 1 233 2103 2332 Uncultured gamma proteobacterium MB11B11 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 75273 239 1 Bacteria SAR92 clade Pseudomonadati Pseudomonadota Gammaproteobacteria Cellvibrionales Porticoccaceae   uncultured gamma proteobacterium MB11B11
17191331 17191331 PRJNA641707_P_NODE_217154_length_194_cov_4.179310_g214491_i0 PRJNA641707 217154 194 4.17931 8.1078614000000009 SAR92 clade bacterium H455 2974818 Bacteria Bacteria 241 3.3300000000000007e-59   NTclustered gi|2293304500|gb|CP103416.1| 2974818 g214491 i0 89.84 392.577319587629 187 19 96 0 3 189 2636538 2636724 SAR92 clade bacterium H455 chromosome blastn 76160 241 1 Bacteria SAR92 clade Pseudomonadati Pseudomonadota Gammaproteobacteria Cellvibrionales Porticoccaceae   SAR92 clade bacterium H455
21643955 21643955 PRJNA888821_P_NODE_27637_length_280_cov_8.101449_g27555_i0 PRJNA888821 27637 280 8.101449 22.6840572 Gammaproteobacteria 1236 Bacteria Bacteria 261 3.94e-65   NTclustered gi|14334237|gb|AY033301.1| 159788 g27555 i0 85.271 469.246428571429 258 33 92 4 24 280 2332 2079 Uncultured gamma proteobacterium MB11B11 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 131389 261 1 Bacteria SAR92 clade Pseudomonadati Pseudomonadota Gammaproteobacteria Cellvibrionales Porticoccaceae   uncultured gamma proteobacterium MB11B11
22066362 22066362 PRJNA330616_P_NODE_9858_length_264_cov_1.423256_g9449_i0 PRJNA330616 9858 264 1.423256 3.75739584 SAR92 clade bacterium H455 2974818 Bacteria Bacteria 220 6.25e-53   NTclustered gi|2293304500|gb|CP103416.1| 2974818 g9449 i0 90.909 8.68560606060606 165 14 63 1 48 212 1034623 1034460 SAR92 clade bacterium H455 chromosome blastn 2293 220 1 Bacteria SAR92 clade Pseudomonadati Pseudomonadota Gammaproteobacteria Cellvibrionales Porticoccaceae   SAR92 clade bacterium H455
24827670 24827670 PRJNA630162_P_NODE_114020_length_177_cov_2.960938_g112497_i0 PRJNA630162 114020 177 2.960938 5.24086026 SAR92 clade bacterium H455 2974818 Bacteria Bacteria 95.3 2.45e-15   NTclustered gi|2293304500|gb|CP103416.1| 2974818 g112497 i0 87.654 8.46892655367232 81 10 46 0 2 82 2635047 2635127 SAR92 clade bacterium H455 chromosome blastn 1499 95.3 1 Bacteria SAR92 clade Pseudomonadati Pseudomonadota Gammaproteobacteria Cellvibrionales Porticoccaceae   SAR92 clade bacterium H455
26463081 26463081 PRJEB14175_P_NODE_59168_length_482_cov_104.320665_g56915_i0 PRJEB14175 59168 482 104.320665 502.8256053 SAR92 clade bacterium H455 2974818 Bacteria Bacteria 599 1.3399999999999997e-166   NTclustered gi|2293304500|gb|CP103416.1| 2974818 g56915 i0 90.217 369.46887966805 460 43 95 2 25 482 2636724 2636265 SAR92 clade bacterium H455 chromosome blastn 178084 599 1 Bacteria SAR92 clade Pseudomonadati Pseudomonadota Gammaproteobacteria Cellvibrionales Porticoccaceae   SAR92 clade bacterium H455

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;