RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn", tax_clade = "Mastocarpus papillatus complex" and tax_phylum = "Rhodophyta"

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tax_superkingdom 1

tax_phylum 1

  • Rhodophyta · 1 ✖

tax_clade 1

  • Mastocarpus papillatus complex · 1 ✖

bioproject 1

analysis 1

  • blastn · 1 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10805866 10805866 PRJNA630162_P_NODE_141029_length_166_cov_4147.777778_g139506_i0 PRJNA630162 141029 166 4147.777778 6885.31111148 Mastocarpus papillatus 31436 Rhodophyta other_Eukaryota 274 2.73e-69   NTclustered gi|1070109006|ref|NC_031167.1| 31436 g139506 i0 96.386 179.144578313253 166 6 100 0 1 166 26130 26295 Mastocarpus papillatus voucher UC2050562 plastid, complete genome blastn 29738 274 1 Eukaryota Mastocarpus papillatus complex   Rhodophyta Florideophyceae Gigartinales Phyllophoraceae Mastocarpus Mastocarpus papillatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;