RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 6 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
601941 601941 PRJNA630162_P_NODE_169701_length_154_cov_5.571429_g168178_i0 PRJNA630162 169701 154 5.571429 8.58000066 uncultured Fidelibacterota bacterium HF0010_18O13 710789 Bacteria Bacteria 139 9.43e-29   NTclustered gi|297180711|gb|GU474850.1| 710789 g168178 i0 89.286 81.0779220779221 112 10 72 2 44 154 16769 16659 Uncultured SAR406 cluster bacterium HF0010_18O13 genomic sequence blastn 12486 139 1 Bacteria FCB group Pseudomonadati Fidelibacterota         uncultured Fidelibacterota bacterium HF0010_18O13
5490540 5490540 PRJNA316313_P_NODE_286865_length_187_cov_2.520000_g285479_i0 PRJNA316313 286865 187 2.52 4.7124 Fidelibacterota bacterium 2026760 Bacteria Bacteria 73.1 1.23e-8   NTclustered gi|2108350698|gb|CP070656.1| 2026760 g285479 i0 92.157 0.272727272727273 51 4 27 0 1 51 65304 65354 MAG: Fidelibacterota bacterium isolate bin809 chromosome blastn 51 73.1 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
12089968 12089968 PRJNA640350_P_NODE_40090_length_152_cov_1.113821_g39929_i0 PRJNA640350 40090 152 1.113821 1.6930079200000001 Fidelibacterota bacterium 2026760 Bacteria Bacteria 69.4 1.23e-7   NTclustered gi|2108404171|gb|CP070638.1| 2026760 g39929 i0 83.133 1.51973684210526 83 6 52 3 50 128 319833 319755 MAG: Fidelibacterota bacterium isolate bin92 chromosome blastn 231 69.4 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
20991999 20991999 PRJNA611476_P_NODE_54997_length_295_cov_1.247748_g54206_i0 PRJNA611476 54997 295 1.247748 3.6808566 Fidelibacterota bacterium 2026760 Bacteria Bacteria 56.5 0.002   NTclustered gi|2108350698|gb|CP070656.1| 2026760 g54206 i0 96.97 0.223728813559322 33 1 11 0 236 268 1757056 1757088 MAG: Fidelibacterota bacterium isolate bin809 chromosome blastn 66 56.5 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
23474680 23474680 PRJNA556992_P_NODE_1037979_length_226_cov_5.464052_g1035789_i0 PRJNA556992 1037979 226 5.464052 12.34875752 Fidelibacter multiformis 3377529 Bacteria Bacteria 60.2 1.2e-4   NTclustered gi|2752026413|dbj|AP035449.1| 3377529 g1035789 i0 97.143 0.415929203539823 35 1 15 0 128 162 2412191 2412157 Candidatus Neomarinimicrobiota bacterium IA91 DNA, complete genome blastn 94 60.2 1 Bacteria FCB group Pseudomonadati Fidelibacterota Fidelibacteria Fidelibacterales Fidelibacteraceae Fidelibacter Fidelibacter multiformis
26326218 26326218 PRJEB14175_P_NODE_49807_length_528_cov_15.668094_g47574_i0 PRJEB14175 49807 528 15.668094 82.72753632 Fidelibacter multiformis 3377529 Bacteria Bacteria 274 1.02e-68   NTclustered gi|2752026413|dbj|AP035449.1| 3377529 g47574 i0 76.967 147.295454545455 521 95 96 21 24 528 805686 806197 Candidatus Neomarinimicrobiota bacterium IA91 DNA, complete genome blastn 77772 274 1 Bacteria FCB group Pseudomonadati Fidelibacterota Fidelibacteria Fidelibacterales Fidelibacteraceae Fidelibacter Fidelibacter multiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;