RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Adleribacteriota"

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bioproject 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Adleribacteriota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3152695 3152695 PRJNA630162_P_NODE_149403_length_164_cov_4.617391_g147880_i0 PRJNA630162 149403 164 4.617391 7.57252124 Candidatus Adlerbacteria bacterium GW2011_GWC1_50_9 1618608 Bacteria Bacteria 185 1.2899999999999997e-42   NTclustered gi|1118703551|gb|KX123464.1| 1618608 g147880 i0 88.387 63.640243902439 155 16 94 2 11 164 1 154 Candidatus Adlerbacteria bacterium GW2011_GWC1_50_9 16S ribosomal RNA gene, partial sequence blastn 10437 185 1 Bacteria Bacteria candidate phyla   Candidatus Adleribacteriota         Candidatus Adlerbacteria bacterium GW2011_GWC1_50_9
23425301 23425301 PRJNA493827_P_NODE_40279_length_574_cov_2.089820_g38099_i0 PRJNA493827 40279 574 2.08982 11.9955668 Candidatus Adlerbacteria bacterium GW2011_GWC1_50_9 1618608 Bacteria Bacteria 693 0   NTclustered gi|1118703551|gb|KX123464.1| 1618608 g38099 i0 88.988 87.3954703832753 563 59 98 3 1 561 561 1122 Candidatus Adlerbacteria bacterium GW2011_GWC1_50_9 16S ribosomal RNA gene, partial sequence blastn 50165 693 1 Bacteria Bacteria candidate phyla   Candidatus Adleribacteriota         Candidatus Adlerbacteria bacterium GW2011_GWC1_50_9

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;