RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA999747" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA999747 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2549888 2549888 PRJNA999747_S_NODE_4482_length_151_cov_1.850000_g4450_i0 PRJNA999747 4482 151 1.85 2.7935 Parvicapsula 109800 Cnidaria other_Eukaryota 91.6 2.61e-14   NTclustered gi|605060084|gb|KF874224.1| 109801 g4450 i0 86.905 4.84105960264901 84 7 55 4 59 141 1110 1190 Parvicapsula minibicornis 28S ribosomal RNA gene, partial sequence blastn 731 91.6 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Parvicapsulidae Parvicapsula Parvicapsula minibicornis
13734070 13734070 PRJNA999747_S_NODE_1011_length_291_cov_1214.353846_g979_i0 PRJNA999747 1011 291 1214.353846 3533.76969186 Eucheilota maculata 661990 Cnidaria other_Eukaryota 161 4.29e-35   NTclustered gi|256674540|gb|FJ550444.1| 661990 g979 i0 92.105 51.2027491408935 114 9 52 0 175 288 2173 2286 Eucheilota maculata 28S ribosomal RNA gene, partial sequence blastn 14900 161 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Campanulariidae Eucheilota Eucheilota maculata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;