RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA999747" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 2 ✖

bioproject 1

  • PRJNA999747 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7358284 7358284 PRJNA999747_S_NODE_3966_length_159_cov_1.960938_g3934_i0 PRJNA999747 3966 159 1.960938 3.11789142 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 52.8 0.013   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g3934 i0 100 0.176100628930818 28 0 18 0 1 28 31 4 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 28 52.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
21382738 21382738 PRJNA999747_S_NODE_2657_length_190_cov_7.886792_g2625_i0 PRJNA999747 2657 190 7.886792 14.9849048 Ripajed virus 3130769 Viruses Viruses 91.6 3.46e-14   NTclustered gi|2717320728|gb|PP173071.1| 3130769 g2625 i0 89.041 3.00526315789474 73 8 38 0 95 167 134 206 MAG: Ripajed virus isolate KCAP3_k141_11048 genomic sequence blastn 571 91.6 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripajed virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;