RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA999747" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 5 ✖

bioproject 1

  • PRJNA999747 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3826111 3826111 PRJNA999747_S_NODE_1523_length_245_cov_4.121495_g1491_i0 PRJNA999747 1523 245 4.121495 10.09766275 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 63.9 1.02e-5   NTclustered gi|2719226838|gb|PP695237.1| 51637 g1491 i0 100 14.1469387755102 34 0 14 0 167 200 4007 3974 Naegleria lovaniensis strain TS rDNA-containing extrachromosomal element genomic sequence blastn 3466 63.9 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
9908751 9908751 PRJNA999747_S_NODE_148_length_568_cov_24.102421_g126_i0 PRJNA999747 148 568 24.102421 136.90175128 Decastava sp. 3023511 Euglenozoa other_Eukaryota 983 0   NTclustered gi|2431695564|gb|OQ331009.1| 3023511 g126 i0 98.909 47.6285211267606 550 6 97 0 1 550 1981 1432 Decastava sp. isolate SPO2 small subunit ribosomal RNA gene, partial sequence blastn 27053 983 1 Eukaryota Discoba   Euglenozoa Euglenida     Decastava Decastava sp.
12459771 12459771 PRJNA999747_S_NODE_750_length_326_cov_36.010169_g718_i0 PRJNA999747 750 326 36.010169 117.39315094 uncultured marine diplonemid 547051 Euglenozoa other_Eukaryota 250 1.01e-61   NTclustered gi|223047901|gb|FJ032685.1| 547051 g718 i0 81.098 108.343558282209 328 48 99 12 1 323 1141 823 Uncultured marine diplonemid clone Ma131_1A46 28S ribosomal RNA gene, partial sequence blastn 35320 250 1 Eukaryota Discoba   Euglenozoa Diplonemea       uncultured marine diplonemid
20107155 20107155 PRJNA999747_S_NODE_56_length_781_cov_24.414667_g43_i0 PRJNA999747 56 781 24.414667 190.67854927 Decastava sp. 3023511 Euglenozoa other_Eukaryota 1378 0   NTclustered gi|2431695564|gb|OQ331009.1| 3023511 g43 i0 98.59 43.9398207426376 780 10 99 1 1 779 1413 634 Decastava sp. isolate SPO2 small subunit ribosomal RNA gene, partial sequence blastn 34317 1378 1 Eukaryota Discoba   Euglenozoa Euglenida     Decastava Decastava sp.
22657601 22657601 PRJNA999747_S_NODE_218_length_505_cov_10.723629_g192_i0 PRJNA999747 218 505 10.723629 54.15432645 Decastava sp. 3023511 Euglenozoa other_Eukaryota 887 0   NTclustered gi|2431695564|gb|OQ331009.1| 3023511 g192 i0 98.606 35.0217821782178 502 5 99 2 3 502 502 1 Decastava sp. isolate SPO2 small subunit ribosomal RNA gene, partial sequence blastn 17686 887 1 Eukaryota Discoba   Euglenozoa Euglenida     Decastava Decastava sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;