RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA998413" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA998413 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3529730 3529730 PRJNA998413_S_NODE_11143_length_216_cov_0.875817_g11112_i0 PRJNA998413 11143 216 0.875817 1.89176472 Infundibulicybe geotropa 230767 Fungi Fungi 372 1.29e-98   NTclustered gi|66864442|gb|DQ071821.1| 230767 g11112 i0 97.685 100.689814814815 216 5 100 0 1 216 411 626 Infundibulicybe geotropa voucher GLM 45881 28S large subunit ribosomal RNA gene, partial sequence blastn 21749 372 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales   Infundibulicybe Infundibulicybe geotropa
9907295 9907295 PRJNA998413_S_NODE_12808_length_210_cov_3.646259_g12777_i0 PRJNA998413 12808 210 3.646259 7.6571439 Desarmillaria tabescens 1929756 Fungi Fungi 278 2.79e-70   NTclustered gi|2607580171|ref|XM_060481406.1| 1929756 g12777 i0 90.476 1 210 20 100 0 1 210 297 506 Desarmillaria tabescens uncharacterized protein (EV420DRAFT_252419), mRNA blastn 210 278 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Physalacriaceae Desarmillaria Desarmillaria tabescens
16281910 16281910 PRJNA998413_S_NODE_14273_length_196_cov_2.518797_g14242_i0 PRJNA998413 14273 196 2.518797 4.93684212 Malassezia globosa 76773 Fungi Fungi 357 3.2099999999999996e-94   NTclustered gi|1805972860|gb|CP046440.1| 76773 g14242 i0 99.49 64.1938775510204 196 1 100 0 1 196 1676 1871 Malassezia globosa strain CBS7966 mitochondrion, complete genome blastn 12582 357 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
21676368 21676368 PRJNA998413_S_NODE_4597_length_281_cov_2.848624_g4566_i0 PRJNA998413 4597 281 2.848624 8.00463344 Ustilaginaceae 5268 Fungi Fungi 69.4 2.57e-7   NTclustered gi|2037032498|ref|XR_005960732.1| 120017 g4566 i0 77.519 13.6298932384342 129 19 44 10 89 211 3496 3620 Ustilago hordei ribosomal RNA (UHO2_10224), rRNA blastn 3830 69.4 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Ustilago Ustilago hordei
22951700 22951700 PRJNA998413_S_NODE_6878_length_250_cov_0.860963_g6847_i0 PRJNA998413 6878 250 0.860963 2.1524075 Opisthokonta 33154 Fungi Fungi 462 8.83e-126   NTclustered gi|915512619|gb|KP825402.1| 76775 g6847 i0 100 99.984 250 0 100 0 1 250 308 59 Malassezia restricta strain ISOSEB46F 28S ribosomal RNA gene, partial sequence blastn 24996 462 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
25205208 25205208 PRJNA998413_S_NODE_10120_length_221_cov_3.310127_g10089_i0 PRJNA998413 10120 221 3.310127 7.31538067 Acaromyces ingoldii 215250 Fungi Fungi 115 2.4600000000000003e-21   NTclustered gi|1418948218|ref|XM_025518417.1| 215250 g10089 i0 90 7.51131221719457 90 8 40 1 132 220 490 401 Acaromyces ingoldii ribosomal protein S4 (FA10DRAFT_197793), mRNA blastn 1660 115 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Exobasidiales Cryptobasidiaceae Acaromyces Acaromyces ingoldii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;