contig_metadata
12 rows where analysis = "blastn", bioproject = "PRJNA998413" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 979193 | 979193 | PRJNA998413_S_NODE_5021_length_274_cov_1.270142_g4990_i0 | PRJNA998413 | 5021 | 274 | 1.270142 | 3.48018908 | Paenibacillus sp. Cedars | 1980674 | Bacteria | Bacteria | 507 | 4.47e-139 | NTclustered | gi|1394605008|gb|CP020866.1| | 1980674 | g4990 | i0 | 100 | 16.3503649635037 | 274 | 0 | 100 | 0 | 1 | 274 | 5427441 | 5427714 | Paenibacillus sp. Cedars chromosome, complete genome | blastn | 4480 | 507 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus sp. Cedars | ||
| 1273994 | 1273994 | PRJNA998413_S_NODE_9841_length_223_cov_1.675000_g9810_i0 | PRJNA998413 | 9841 | 223 | 1.675 | 3.73525 | Staphylococcus | 1279 | Bacteria | Bacteria | 412 | 7.88e-111 | NTclustered | gi|1714026535|gb|CP031277.1| | 1290 | g9810 | i0 | 100 | 84.7399103139013 | 223 | 0 | 100 | 0 | 1 | 223 | 1586199 | 1585977 | Staphylococcus hominis strain 19A chromosome, complete genome | blastn | 18897 | 412 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus hominis | ||
| 3825926 | 3825926 | PRJNA998413_S_NODE_5203_length_271_cov_1.865385_g5172_i0 | PRJNA998413 | 5203 | 271 | 1.865385 | 5.05519335 | root | 1 | Root_unresolved | Root_unresolved | 501 | 2.05e-137 | NTclustered | gi|1796975023|gb|CP033086.1| | 1280 | g5172 | i0 | 100 | 101.80442804428 | 271 | 0 | 100 | 0 | 1 | 271 | 2411010 | 2410740 | Staphylococcus aureus strain WH9628 chromosome | blastn | 27589 | 501 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 4807171 | 4807171 | PRJNA998413_S_NODE_7824_length_240_cov_1.497175_g7793_i0 | PRJNA998413 | 7824 | 240 | 1.497175 | 3.59322 | Granulicatella elegans | 137732 | Bacteria | Bacteria | 333 | 6.88e-87 | NTclustered | gi|2127543886|gb|CP085953.1| | 137732 | g7793 | i0 | 91.667 | 1 | 240 | 20 | 100 | 0 | 1 | 240 | 1840855 | 1841094 | Granulicatella elegans strain FDAARGOS_1559 chromosome, complete genome | blastn | 240 | 333 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Carnobacteriaceae | Granulicatella | Granulicatella elegans | ||
| 7356909 | 7356909 | PRJNA998413_S_NODE_9326_length_227_cov_2.158537_g9295_i0 | PRJNA998413 | 9326 | 227 | 2.158537 | 4.89987899 | Anaerococcus mediterraneensis | 1870984 | Bacteria | Bacteria | 396 | 8.109999999999997e-106 | NTclustered | gi|1105524756|emb|LT635772.1| | 1870984 | g9295 | i0 | 98.655 | 316.823788546256 | 223 | 3 | 98 | 0 | 1 | 223 | 437233 | 437455 | Anaerococcus sp. Marseille-P2765 strain Marseille-P2765T genome assembly, chromosome: contig00001 | blastn | 71919 | 396 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Anaerococcus | Anaerococcus mediterraneensis | ||
| 7652015 | 7652015 | PRJNA998413_S_NODE_13226_length_209_cov_1.376712_g13195_i0 | PRJNA998413 | 13226 | 209 | 1.376712 | 2.87732808 | Streptococcus | 1301 | Bacteria | Bacteria | 307 | 3.54e-79 | NTclustered | gi|1943211519|gb|CP065707.1| | 1303 | g13195 | i0 | 93.269 | 34.7751196172249 | 208 | 14 | 99 | 0 | 1 | 208 | 1512426 | 1512219 | Streptococcus oralis strain FDAARGOS_885 chromosome, complete genome | blastn | 7268 | 307 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 11477756 | 11477756 | PRJNA998413_S_NODE_6109_length_258_cov_1.676923_g6078_i0 | PRJNA998413 | 6109 | 258 | 1.676923 | 4.32646134 | Anaerococcus | 165779 | Bacteria | Bacteria | 405 | 1.56e-108 | NTclustered | gi|1374529452|ref|NR_076129.2| | 33034 | g6078 | i0 | 94.981 | 161.589147286822 | 259 | 11 | 100 | 2 | 1 | 258 | 782 | 525 | Anaerococcus prevotii strain DSM 20548 23S ribosomal RNA, complete sequence | blastn | 41690 | 405 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Anaerococcus | Anaerococcus prevotii | ||
| 18830901 | 18830901 | PRJNA998413_S_NODE_14115_length_198_cov_2.481481_g14084_i0 | PRJNA998413 | 14115 | 198 | 2.481481 | 4.91333238 | Roseburia rectibacter | 2763062 | Bacteria | Bacteria | 56.5 | 0.001 | NTclustered | gi|2206258461|gb|CP092473.1| | 2763062 | g14084 | i0 | 96.97 | 0.166666666666667 | 33 | 1 | 17 | 0 | 143 | 175 | 2892662 | 2892630 | Roseburia rectibacter strain NSJ-69 chromosome, complete genome | blastn | 33 | 56.5 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Roseburia | Roseburia rectibacter | ||
| 20400350 | 20400350 | PRJNA998413_S_NODE_3316_length_311_cov_2.463710_g3285_i0 | PRJNA998413 | 3316 | 311 | 2.46371 | 7.6621381 | Staphylococcus | 1279 | Bacteria | Bacteria | 575 | 1.3899999999999995e-159 | NTclustered | gi|1176884116|gb|CP020463.1| | 1282 | g3285 | i0 | 100 | 100 | 311 | 0 | 100 | 0 | 1 | 311 | 1695894 | 1695584 | Staphylococcus epidermidis strain 1457 chromosome, complete genome | blastn | 31100 | 575 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 20400364 | 20400364 | PRJNA998413_S_NODE_9856_length_223_cov_1.462500_g9825_i0 | PRJNA998413 | 9856 | 223 | 1.4625 | 3.261375 | Streptococcus | 1301 | Bacteria | Bacteria | 398 | 2.21e-106 | NTclustered | gi|2179901676|gb|CP046524.1| | 1303 | g9825 | i0 | 99.541 | 320.645739910314 | 218 | 1 | 98 | 0 | 1 | 218 | 18381 | 18598 | Streptococcus oralis strain SOT chromosome, complete genome | blastn | 71504 | 398 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 23931652 | 23931652 | PRJNA998413_S_NODE_9319_length_227_cov_2.451220_g9288_i0 | PRJNA998413 | 9319 | 227 | 2.45122 | 5.5642694 | Staphylococcus epidermidis | 1282 | Bacteria | Bacteria | 420 | 4.81e-113 | NTclustered | gi|1214725545|gb|CP022247.1| | 1282 | g9288 | i0 | 100 | 100.63436123348 | 227 | 0 | 100 | 0 | 1 | 227 | 1909417 | 1909643 | Staphylococcus epidermidis strain AMT chromosome, complete genome | blastn | 22844 | 420 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 25205350 | 25205350 | PRJNA998413_S_NODE_7700_length_241_cov_2.084270_g7669_i0 | PRJNA998413 | 7700 | 241 | 2.08427 | 5.0230907 | Streptococcus pneumoniae | 1313 | Bacteria | Bacteria | 446 | 8.519999999999999e-121 | NTclustered | gi|404276812|emb|HE983624.1| | 869309 | g7669 | i0 | 100 | 316 | 241 | 0 | 100 | 0 | 1 | 241 | 18459 | 18699 | Streptococcus pneumoniae SPNA45, complete genome | blastn | 76156 | 446 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus pneumoniae |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;