RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA994052" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA994052 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
976232 976232 PRJNA994052_P_NODE_23921_length_297_cov_118.482143_g22686_i0 PRJNA994052 23921 297 118.482143 351.89196471 Brachionus rubens 392764 Rotifera other_Eukaryota 246 1.18e-60   NTclustered gi|632795126|gb|KJ489417.1| 392764 g22686 i0 83.456 8.72390572390572 272 37 91 5 7 276 10913 11178 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 2591 246 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
4804202 4804202 PRJNA994052_P_NODE_30104_length_281_cov_127.076923_g28862_i0 PRJNA994052 30104 281 127.076923 357.08615363 Brachionus rubens 392764 Rotifera other_Eukaryota 241 5.15e-59   NTclustered gi|632795126|gb|KJ489417.1| 392764 g28862 i0 83.088 8.74021352313167 272 38 96 5 7 276 10913 11178 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 2456 241 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
13729784 13729784 PRJNA994052_P_NODE_26291_length_291_cov_121.399083_g25051_i0 PRJNA994052 26291 291 121.399083 353.27133153 Brachionus rubens 392764 Rotifera other_Eukaryota 241 5.36e-59   NTclustered gi|632795126|gb|KJ489417.1| 392764 g25051 i0 83.088 8.90721649484536 272 38 93 5 7 276 10913 11178 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 2592 241 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;