RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJNA994052" and tax_phylum = "Mollusca"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 14 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA994052 · 14 ✖

analysis 1

  • blastn · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2251938 2251938 PRJNA994052_P_NODE_61542_length_223_cov_281.780000_g60286_i0 PRJNA994052 61542 223 281.78 628.3694 Leptochiton asellus 211853 Mollusca Mollusca 165 2.44e-36   NTclustered gi|34369208|gb|AY145414.1| 211853 g60286 i0 87.943 6.65470852017937 141 16 63 1 81 221 2683 2544 Leptochiton asellus 28S ribosomal RNA gene, partial sequence blastn 1484 165 1 Eukaryota Opisthokonta Metazoa Mollusca Polyplacophora Lepidopleurida Lepidopleuridae Leptochiton Leptochiton asellus
2548919 2548919 PRJNA994052_P_NODE_69822_length_212_cov_169.597122_g68566_i0 PRJNA994052 69822 212 169.597122 359.54589864 Opisthokonta 33154 Mollusca Mollusca 93.5 1.1e-14   NTclustered gi|2441993380|ref|XM_053520321.1| 6596 g68566 i0 92.308 10.0283018867925 65 5 31 0 1 65 332 396 PREDICTED: Mercenaria mercenaria histone H4-like (LOC128547447), mRNA blastn 2126 93.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Mercenaria Mercenaria mercenaria
3526796 3526796 PRJNA994052_P_NODE_20123_length_308_cov_75.055319_g18897_i0 PRJNA994052 20123 308 75.055319 231.17038252 Crassostrea virginica 6565 Mollusca Mollusca 86.1 2.83e-12   NTclustered gi|1242758558|ref|XM_022462631.1| 6565 g18897 i0 87.671 0.237012987012987 73 9 24 0 23 95 952 1024 PREDICTED: Crassostrea virginica guanine nucleotide-binding protein subunit beta-2-like 1 (LOC111121370), mRNA blastn 73 86.1 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Crassostrea Crassostrea virginica
3527256 3527256 PRJNA994052_P_NODE_59883_length_226_cov_34.895425_g58627_i0 PRJNA994052 59883 226 34.895425 78.8636605 Octopus sinensis 2607531 Mollusca Mollusca 54.7 0.006   NTclustered gi|1914631023|ref|XM_029788727.2| 2607531 g58627 i0 100 0.128318584070796 29 0 13 0 164 192 2039 2067 PREDICTED: Octopus sinensis zinc finger protein OZF-like (LOC115218793), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus sinensis
5101402 5101402 PRJNA994052_P_NODE_51124_length_239_cov_52.301205_g49869_i0 PRJNA994052 51124 239 52.301205 124.99987995 Opisthokonta 33154 Mollusca Mollusca 54.7 0.006   NTclustered gi|2912998015|dbj|AP039603.1| 145626 g49869 i0 96.875 0.414225941422594 32 1 13 0 15 46 15926940 15926971 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 22, sequence blastn 99 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
8629219 8629219 PRJNA994052_P_NODE_20647_length_307_cov_73.880342_g19420_i0 PRJNA994052 20647 307 73.880342 226.81264994 Crassostrea virginica 6565 Mollusca Mollusca 86.1 2.82e-12   NTclustered gi|1242758558|ref|XM_022462631.1| 6565 g19420 i0 87.671 0.237785016286645 73 9 24 0 23 95 952 1024 PREDICTED: Crassostrea virginica guanine nucleotide-binding protein subunit beta-2-like 1 (LOC111121370), mRNA blastn 73 86.1 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Crassostrea Crassostrea virginica
9904533 9904533 PRJNA994052_P_NODE_31788_length_277_cov_23.127451_g30544_i0 PRJNA994052 31788 277 23.127451 64.06303927 Gigantopelta aegis 1735272 Mollusca Mollusca 58.4 5.48e-4   NTclustered gi|2034312691|ref|XM_041497935.1| 1735272 g30544 i0 100 0.212996389891697 31 0 11 0 127 157 9085 9115 PREDICTED: Gigantopelta aegis ras-related protein R-Ras2-like (LOC121371789), mRNA blastn 59 58.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Neomphalida Peltospiridae Gigantopelta Gigantopelta aegis
16279618 16279618 PRJNA994052_P_NODE_72593_length_209_cov_35.889706_g71337_i0 PRJNA994052 72593 209 35.889706 75.00948554 Lottia gigantea 225164 Mollusca Mollusca 113 8.290000000000001e-21   NTclustered gi|676463422|ref|XM_009058344.1| 225164 g71337 i0 80.405 9.55980861244019 148 29 71 0 32 179 1043 1190 Lottia gigantea hypothetical protein mRNA blastn 1998 113 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lottiidae Lottia Lottia gigantea
17554117 17554117 PRJNA994052_P_NODE_23654_length_298_cov_91.462222_g22419_i0 PRJNA994052 23654 298 91.462222 272.55742156 Crassostrea virginica 6565 Mollusca Mollusca 86.1 2.73e-12   NTclustered gi|1242758558|ref|XM_022462631.1| 6565 g22419 i0 87.671 0.24496644295302 73 9 24 0 204 276 1024 952 PREDICTED: Crassostrea virginica guanine nucleotide-binding protein subunit beta-2-like 1 (LOC111121370), mRNA blastn 73 86.1 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Crassostrea Crassostrea virginica
20103016 20103016 PRJNA994052_P_NODE_47256_length_245_cov_247.302326_g46005_i0 PRJNA994052 47256 245 247.302326 605.8906987 Leptochiton asellus 211853 Mollusca Mollusca 165 2.72e-36   NTclustered gi|34369208|gb|AY145414.1| 211853 g46005 i0 85.535 0.775510204081633 159 22 65 1 85 243 2701 2544 Leptochiton asellus 28S ribosomal RNA gene, partial sequence blastn 190 165 1 Eukaryota Opisthokonta Metazoa Mollusca Polyplacophora Lepidopleurida Lepidopleuridae Leptochiton Leptochiton asellus
21379034 21379034 PRJNA994052_P_NODE_81817_length_198_cov_191.552000_g80560_i0 PRJNA994052 81817 198 191.552 379.27296 Bradybaena similaris 145626 Mollusca Mollusca 178 2.71e-40   NTclustered gi|2913002590|dbj|AP039619.1| 145626 g80560 i0 83.59 143.348484848485 195 27 96 5 3 193 251838 252031 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, sequence_id: unanchored10, sequence blastn 28383 178 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
22653283 22653283 PRJNA994052_P_NODE_19658_length_309_cov_73.432203_g18435_i0 PRJNA994052 19658 309 73.432203 226.90550727 Crassostrea virginica 6565 Mollusca Mollusca 86.1 2.84e-12   NTclustered gi|1242758558|ref|XM_022462631.1| 6565 g18435 i0 87.671 0.236245954692557 73 9 24 0 215 287 1024 952 PREDICTED: Crassostrea virginica guanine nucleotide-binding protein subunit beta-2-like 1 (LOC111121370), mRNA blastn 73 86.1 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Crassostrea Crassostrea virginica
23928747 23928747 PRJNA994052_P_NODE_22779_length_301_cov_75.877193_g21550_i0 PRJNA994052 22779 301 75.877193 228.39035093 Crassostrea virginica 6565 Mollusca Mollusca 86.1 2.76e-12   NTclustered gi|1242758558|ref|XM_022462631.1| 6565 g21550 i0 87.671 0.242524916943522 73 9 24 0 23 95 952 1024 PREDICTED: Crassostrea virginica guanine nucleotide-binding protein subunit beta-2-like 1 (LOC111121370), mRNA blastn 73 86.1 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Crassostrea Crassostrea virginica
25202802 25202802 PRJNA994052_P_NODE_61540_length_223_cov_282.120000_g60284_i0 PRJNA994052 61540 223 282.12 629.1276 Leptochiton asellus 211853 Mollusca Mollusca 165 2.44e-36   NTclustered gi|34369208|gb|AY145414.1| 211853 g60284 i0 85.535 5.25112107623318 159 22 71 1 63 221 2701 2544 Leptochiton asellus 28S ribosomal RNA gene, partial sequence blastn 1171 165 1 Eukaryota Opisthokonta Metazoa Mollusca Polyplacophora Lepidopleurida Lepidopleuridae Leptochiton Leptochiton asellus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;