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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA994052" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA994052 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1273288 1273288 PRJNA994052_P_NODE_6961_length_376_cov_1665.366337_g5885_i0 PRJNA994052 6961 376 1665.366337 6261.77742712 Pleistophora 35233 Fungi Fungi 652 0   NTclustered gi|264683451|gb|GU126672.1| 689837 g5885 i0 99.174 97.2287234042553 363 2 97 1 1 363 473 834 Pleistophora hyphessobryconis 16S ribosomal RNA gene, partial sequence blastn 36558 652 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Pleistophora Pleistophora hyphessobryconis
7651325 7651325 PRJNA994052_P_NODE_7706_length_365_cov_1680.801370_g6559_i0 PRJNA994052 7706 365 1680.80137 6134.9250005 Pleistophora 35233 Fungi Fungi 641 1.62e-179   NTclustered gi|264683451|gb|GU126672.1| 689837 g6559 i0 99.16 98.5917808219178 357 2 98 1 9 365 828 473 Pleistophora hyphessobryconis 16S ribosomal RNA gene, partial sequence blastn 35986 641 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Pleistophora Pleistophora hyphessobryconis
8629092 8629092 PRJNA994052_P_NODE_11887_length_323_cov_79.436000_g10668_i0 PRJNA994052 11887 323 79.436 256.57828 Fusasporis stethaprioni 2777717 Fungi Fungi 451 2.5600000000000004e-122   NTclustered gi|1914073495|gb|MW077214.1| 2777717 g10668 i0 93.443 81.5356037151703 305 19 94 1 13 316 789 485 Fusasporis stethaprioni strain 2018 small subunit ribosomal RNA gene, partial sequence blastn 26336 451 1 Eukaryota Opisthokonta Fungi Microsporidia     Glugeidae Fusasporis Fusasporis stethaprioni
16575887 16575887 PRJNA994052_P_NODE_77373_length_203_cov_144.938462_g76116_i0 PRJNA994052 77373 203 144.938462 294.22507786 Pleistophora 35233 Fungi Fungi 366 5.56e-97   NTclustered gi|264683451|gb|GU126672.1| 689837 g76116 i0 99.502 98.8571428571429 201 1 99 0 1 201 1142 942 Pleistophora hyphessobryconis 16S ribosomal RNA gene, partial sequence blastn 20068 366 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Pleistophora Pleistophora hyphessobryconis
20102764 20102764 PRJNA994052_P_NODE_27536_length_288_cov_29.455814_g26295_i0 PRJNA994052 27536 288 29.455814 84.83274432 Pseudoloma neurophilia 146866 Fungi Fungi 525 1.3099999999999996e-144   NTclustered gi|11993647|gb|AF322654.1| 146866 g26295 i0 99.65 100.673611111111 286 1 99 0 1 286 1627 1912 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 28994 525 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
22653307 22653307 PRJNA994052_P_NODE_21438_length_305_cov_298.310345_g20211_i0 PRJNA994052 21438 305 298.310345 909.84655225 Vairimorpha ceranae 40302 Fungi Fungi 65.8 3.65e-6   NTclustered gi|1389532516|gb|MH349975.1| 40302 g20211 i0 90.385 6.65901639344262 52 2 17 3 143 193 235 284 Vairimorpha ceranae clone 7 small subunit ribosomal RNA gene, partial sequence blastn 2031 65.8 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vairimorpha Vairimorpha ceranae
22653924 22653924 PRJNA994052_P_NODE_77278_length_203_cov_425.453846_g76021_i0 PRJNA994052 77278 203 425.453846 863.67130738 Microsporidium sp. LVPEI.SMW V3S1-FR 1734473 Fungi Fungi 313 7.3499999999999995e-81   NTclustered gi|937656209|gb|KR303710.1| 1734473 g76021 i0 96.316 93.8374384236453 190 7 94 0 11 200 969 780 Microsporidium sp. LVPEI.SMW V3S1-FR small subunit ribosomal RNA gene, partial sequence blastn 19049 313 1 Eukaryota Opisthokonta Fungi Microsporidia       Microsporidium Microsporidium sp. LVPEI.SMW V3S1-FR
23929430 23929430 PRJNA994052_P_NODE_9939_length_340_cov_40.644195_g8733_i0 PRJNA994052 9939 340 40.644195 138.190263 Pseudoloma neurophilia 146866 Fungi Fungi 573 5.54e-159   NTclustered gi|11993647|gb|AF322654.1| 146866 g8733 i0 95.906 97.6088235294118 342 12 100 2 1 340 470 811 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 33187 573 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;