RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA994052" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA994052 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6079538 6079538 PRJNA994052_P_NODE_33305_length_273_cov_33.480000_g32061_i0 PRJNA994052 33305 273 33.48 91.4004 Perichaena dictyonema 2951132 Evosea other_Eukaryota 497 2.68e-136   NTclustered gi|2250222210|gb|ON713340.1| 2951132 g32061 i0 99.632 96.3626373626374 272 1 99 0 1 272 1176 905 Perichaena dictyonema voucher MA59057 small subunit ribosomal RNA gene, partial sequence blastn 26307 497 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Trichiida Trichiidae Perichaena Perichaena dictyonema
10201704 10201704 PRJNA994052_P_NODE_27788_length_287_cov_148.299065_g26547_i0 PRJNA994052 27788 287 148.299065 425.61831655 Stemonitidae 137615 Evosea other_Eukaryota 486 6.139999999999999e-133   NTclustered gi|5712220|gb|AF093247.1|AF093247 101284 g26547 i0 98.897 94.5296167247387 272 3 95 0 10 281 1006 1277 Hyperamoeba sp. ATCC50750 small subunit ribosomal RNA gene, complete sequence blastn 27130 490 0.991836734693878 Eukaryota Amoebozoa   Evosea Eumycetozoa     Hyperamoeba Hyperamoeba sp. ATCC50750
19124363 19124363 PRJNA994052_P_NODE_27035_length_289_cov_146.342593_g25795_i0 PRJNA994052 27035 289 146.342593 422.93009377 Stemonitidae 137615 Evosea other_Eukaryota 497 2.8599999999999998e-136   NTclustered gi|5712220|gb|AF093247.1|AF093247 101284 g25795 i0 99.632 93.9411764705882 272 1 94 0 9 280 1277 1006 Hyperamoeba sp. ATCC50750 small subunit ribosomal RNA gene, complete sequence blastn 27149 501 0.992015968063872 Eukaryota Amoebozoa   Evosea Eumycetozoa     Hyperamoeba Hyperamoeba sp. ATCC50750

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;