RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA994052" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA994052 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
976852 976852 PRJNA994052_P_NODE_79281_length_201_cov_80.687500_g78024_i0 PRJNA994052 79281 201 80.6875 162.181875 Sphaeromyxa zaharoni 275449 Cnidaria other_Eukaryota 60.2 1.04e-4   NTclustered gi|2663986569|emb|OY751524.1| 275449 g78024 i0 100 3.3134328358209 32 0 16 0 159 190 6365 6334 Sphaeromyxa zaharoni isolate 24.2.2011 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA complete sequences blastn 666 60.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Sphaeromyxidae Sphaeromyxa Sphaeromyxa zaharoni
11180004 11180004 PRJNA994052_P_NODE_62169_length_223_cov_6.426667_g60913_i0 PRJNA994052 62169 223 6.426667 14.33146741 Margelopsis haeckelii 2876032 Cnidaria other_Eukaryota 56.5 0.002   NTclustered gi|2095440634|gb|OK139084.1| 2876032 g60913 i0 94.595 0.417040358744395 37 1 16 1 1 36 37 1 Margelopsis haeckelii strain Ost2019 small subunit ribosomal RNA gene, partial sequence blastn 93 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Margelopsidae Margelopsis Margelopsis haeckelii
12752490 12752490 PRJNA994052_P_NODE_64310_length_220_cov_10.312925_g63054_i0 PRJNA994052 64310 220 10.312925 22.688435 Cubozoa 6137 Cnidaria other_Eukaryota 228 3.019999999999999e-55   NTclustered gi|261854611|gb|GQ860995.1| 168719 g63054 i0 88.205 87.8409090909091 195 18 88 5 28 220 1412 1221 Carybdea xaymacana isolate AGC137 28S ribosomal RNA gene, partial sequence blastn 19325 228 1 Eukaryota Opisthokonta Metazoa Cnidaria Cubozoa Carybdeida Carybdeidae Carybdea Carybdea xaymacana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;