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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA994052" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA994052 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6377130 6377130 PRJNA994052_P_NODE_20505_length_308_cov_7.642553_g19279_i0 PRJNA994052 20505 308 7.642553 23.53906324 Loxocephalidae 311388 SAR_Eukaryotes SAR_Eukaryotes 246 1.2299999999999999e-60   NTclustered gi|1332983250|gb|MG819725.1| 638335 g19279 i0 96.026 44.5941558441558 151 6 49 0 1 151 1461 1611 Dexiotricha colpidiopsis strain DEX201707a small subunit ribosomal RNA gene, partial sequence blastn 13735 246 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Loxocephalidae Dexiotricha Dexiotricha colpidiopsis
7354446 7354446 PRJNA994052_P_NODE_68406_length_214_cov_75.524823_g67150_i0 PRJNA994052 68406 214 75.524823 161.62312122 Spirostomum yagiui 1471042 SAR_Eukaryotes SAR_Eukaryotes 62.1 3.13e-5   NTclustered gi|2692944869|ref|NC_086648.1| 1471042 g67150 i0 97.222 0.168224299065421 36 1 17 0 172 207 3866 3901 Spirostomum yagiui isolate XKC mitochondrion, complete genome blastn 36 62.1 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Spirostomidae Spirostomum Spirostomum yagiui
9904293 9904293 PRJNA994052_P_NODE_14988_length_313_cov_19.487500_g13767_i0 PRJNA994052 14988 313 19.4875 60.995875 Sorogena stoianovitchae 164621 SAR_Eukaryotes SAR_Eukaryotes 268 2.67e-67   NTclustered gi|169659247|dbj|AB325967.1| 164621 g13767 i0 84.706 79.8083067092652 255 36 81 3 59 313 1292 1041 Sorogena stoianovitchae sbt mRNA for putative beta-tubulin, partial cds blastn 24980 268 1 Eukaryota Sar   Ciliophora Colpodea Sorogenida Sorogenidae Sorogena Sorogena stoianovitchae
16575884 16575884 PRJNA994052_P_NODE_76993_length_204_cov_18.541985_g75736_i0 PRJNA994052 76993 204 18.541985 37.8256494 Euplotes 5935 SAR_Eukaryotes SAR_Eukaryotes 171 4.71e-38   NTclustered gi|405109099|emb|FR873717.1| 5941 g75736 i0 100 88.093137254902 92 0 88 0 111 202 1189 1098 Euplotes eurystomus partial 18S rRNA gene, isolate EM population blastn 17971 171 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes eurystomus
17554167 17554167 PRJNA994052_P_NODE_27934_length_287_cov_30.350467_g26693_i0 PRJNA994052 27934 287 30.350467 87.10584029 Opercularia sp. ZhW-2019a 2582953 SAR_Eukaryotes SAR_Eukaryotes 481 2.86e-131   NTclustered gi|2304601486|gb|OP458307.1| 2582953 g26693 i0 98.885 91.5191637630662 269 3 94 0 18 286 330 62 Opercularia sp. ZhW-2019a large subunit ribosomal RNA gene, partial sequence blastn 26266 481 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Operculariidae Opercularia Opercularia sp. ZhW-2019a
18828132 18828132 PRJNA994052_P_NODE_33155_length_273_cov_159.475000_g31911_i0 PRJNA994052 33155 273 159.475 435.36675 Conchophthirus unionis 3053525 SAR_Eukaryotes SAR_Eukaryotes 390 4.6799999999999996e-104   NTclustered gi|2518630397|gb|OR129902.1| 3053525 g31911 i0 93.846 94.9157509157509 260 15 95 1 15 273 875 616 Conchophthirus unionis isolate HO 24 UC internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 25912 390 1 Eukaryota Sar   Ciliophora Oligohymenophorea Pleuronematida Conchophthiridae Conchophthirus Conchophthirus unionis
18828528 18828528 PRJNA994052_P_NODE_67695_length_215_cov_63.338028_g66439_i0 PRJNA994052 67695 215 63.338028 136.1767602 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 78.7 3.13e-10   NTclustered gi|829163709|ref|XM_001013641.3| 312017 g66439 i0 77.305 3.94883720930233 141 26 64 6 68 205 495 358 Tetrahymena thermophila SB210 60S ribosomal protein L11 partial mRNA blastn 849 78.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
25499667 25499667 PRJNA994052_P_NODE_60220_length_225_cov_397.276316_g58964_i0 PRJNA994052 60220 225 397.276316 893.871711 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 224 4.01e-54   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g58964 i0 89.326 45.4755555555556 178 19 79 0 3 180 2905 3082 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 10232 224 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;