RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA994052" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA994052 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4804502 4804502 PRJNA994052_P_NODE_54204_length_234_cov_96.956522_g52949_i0 PRJNA994052 54204 234 96.956522 226.87826148 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 377 3.04e-100   NTclustered gi|1869331976|gb|CP058704.1| 2052176 g52949 i0 96.889 85.8461538461538 225 7 96 0 10 234 1334101 1334325 Parachlamydiaceae bacterium isolate SSA5 chromosome blastn 20088 377 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium
11179846 11179846 PRJNA994052_P_NODE_48289_length_244_cov_11.578947_g47037_i0 PRJNA994052 48289 244 11.578947 28.25263068 uncultured Chlamydiae bacterium 305355 Bacteria Bacteria 357 4.16e-94   NTclustered gi|2874254045|emb|OY970369.1| 305355 g47037 i0 95.154 155.934426229508 227 9 93 2 19 244 174621 174396 MAG: uncultured Chlamydiae bacterium isolate MFD06092.bin.1.176 genome assembly, chromosome: 1 blastn 38048 357 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia       uncultured Chlamydiae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;