RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA994052" and tax_kingdom = "Shotokuvirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Shotokuvirae · 4 ✖

bioproject 1

  • PRJNA994052 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2548887 2548887 PRJNA994052_P_NODE_63882_length_220_cov_68.707483_g62626_i0 PRJNA994052 63882 220 68.707483 151.1564626 Viruses 10239 Viruses Viruses 361 2.8499999999999998e-95   NTclustered gi|2496529063|gb|OP577481.1| 3042448 g62626 i0 99.495 2.7 198 1 90 0 6 203 2429 2232 Psittaciform parvoviridae sp. strain OBP1/FE1/44/2021, partial genome blastn 594 361 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Psittaciform parvoviridae sp.
7354399 7354399 PRJNA994052_P_NODE_64706_length_219_cov_46.102740_g63450_i0 PRJNA994052 64706 219 46.10274 100.9650006 Psittaciform parvoviridae sp. 3042448 Viruses Viruses 372 1.31e-98   NTclustered gi|2496529063|gb|OP577481.1| 3042448 g63450 i0 99.51 2.47945205479452 204 1 93 0 16 219 357 154 Psittaciform parvoviridae sp. strain OBP1/FE1/44/2021, partial genome blastn 543 372 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Psittaciform parvoviridae sp.
20102692 20102692 PRJNA994052_P_NODE_19856_length_309_cov_21.555085_g18633_i0 PRJNA994052 19856 309 21.555085 66.60521265 Psittaciform aveparvovirus 3042447 Viruses Viruses 484 2.3999999999999998e-132   NTclustered gi|2496529060|gb|OP577480.1| 3042447 g18633 i0 95.946 1.5663430420712 296 7 96 1 13 308 1728 1438 Psittaciform aveparvovirus strain OBP1/FE1/49/2021, partial genome blastn 484 484 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Aveparvovirus Psittaciform aveparvovirus
22653185 22653185 PRJNA994052_P_NODE_14198_length_314_cov_28.008299_g12977_i0 PRJNA994052 14198 314 28.008299 87.94605886 Reagent-associated CRESS-like virus 1 2875809 Viruses Viruses 135 2.8400000000000003e-27   NTclustered gi|2094552989|gb|MZ824237.1| 2875809 g12977 i0 84.028 0.834394904458599 144 19 45 4 8 148 2020 2162 Reagent-associated CRESS-like virus 1 isolate 7 replicase-like gene, partial sequence blastn 262 135 1 Viruses   Shotokuvirae Cressdnaviricota         Reagent-associated CRESS-like virus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;