contig_metadata
23 rows where analysis = "blastn", bioproject = "PRJNA994052" and tax_clade = "PVC group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2251479 | 2251479 | PRJNA994052_P_NODE_23382_length_299_cov_72.672566_g22150_i0 | PRJNA994052 | 23382 | 299 | 72.672566 | 217.29097234 | Polystyrenella longa | 2528007 | Bacteria | Bacteria | 134 | 9.65e-27 | NTclustered | gi|1712652806|gb|CP036281.1| | 2528007 | g22150 | i0 | 88.991 | 18.8260869565217 | 109 | 10 | 36 | 2 | 187 | 293 | 1415588 | 1415480 | Polystyrenella longa strain Pla110 chromosome, complete genome | blastn | 5629 | 134 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Polystyrenella | Polystyrenella longa | |
| 3527363 | 3527363 | PRJNA994052_P_NODE_69823_length_212_cov_168.726619_g68567_i0 | PRJNA994052 | 69823 | 212 | 168.726619 | 357.70043228 | Aureliella sp. | 2795609 | Bacteria | Bacteria | 198 | 2.26e-46 | NTclustered | gi|2626244095|emb|OY829846.1| | 2795609 | g68567 | i0 | 84.314 | 1.50471698113208 | 204 | 31 | 96 | 1 | 8 | 211 | 5640474 | 5640676 | MAG: Aureliella sp. isolate e39ea203-26a8-405f-9782-9267d5c1de48 genome assembly, chromosome: 1 | blastn | 319 | 198 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Aureliella | Aureliella sp. | |
| 4804098 | 4804098 | PRJNA994052_P_NODE_19404_length_310_cov_17.611814_g18181_i0 | PRJNA994052 | 19404 | 310 | 17.611814 | 54.5966234 | Oleiharenicola sp. Vm1 | 3398393 | Bacteria | Bacteria | 108 | 6.09e-19 | NTclustered | gi|2912653302|gb|CP180537.1| | 3398393 | g18181 | i0 | 83.478 | 0.474193548387097 | 115 | 19 | 37 | 0 | 2 | 116 | 2448190 | 2448076 | Oleiharenicola sp. Vm1 chromosome, complete genome | blastn | 147 | 108 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Oleiharenicola | Oleiharenicola sp. Vm1 | |
| 4804273 | 4804273 | PRJNA994052_P_NODE_35884_length_267_cov_43.051546_g34638_i0 | PRJNA994052 | 35884 | 267 | 43.051546 | 114.94762782 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 339 | 1.6699999999999998e-88 | NTclustered | gi|2874254096|emb|OY970179.1| | 412056 | g34638 | i0 | 89.668 | 69.7827715355805 | 271 | 21 | 100 | 5 | 1 | 267 | 1728723 | 1728990 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05521.bin.c.1 genome assembly, chromosome: 1 | blastn | 18632 | 339 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 4804470 | 4804470 | PRJNA994052_P_NODE_51204_length_239_cov_36.493976_g49949_i0 | PRJNA994052 | 51204 | 239 | 36.493976 | 87.22060264 | Opitutus sp. GAS368 | 1882749 | Bacteria | Bacteria | 351 | 1.89e-92 | NTclustered | gi|1085764882|emb|LT629735.1| | 1882749 | g49949 | i0 | 95.067 | 5.61924686192469 | 223 | 11 | 93 | 0 | 1 | 223 | 2195101 | 2195323 | Opitutus sp. GAS368 genome assembly, chromosome: I | blastn | 1343 | 351 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. GAS368 | |
| 4804502 | 4804502 | PRJNA994052_P_NODE_54204_length_234_cov_96.956522_g52949_i0 | PRJNA994052 | 54204 | 234 | 96.956522 | 226.87826148 | Parachlamydiaceae bacterium | 2052176 | Bacteria | Bacteria | 377 | 3.04e-100 | NTclustered | gi|1869331976|gb|CP058704.1| | 2052176 | g52949 | i0 | 96.889 | 85.8461538461538 | 225 | 7 | 96 | 0 | 10 | 234 | 1334101 | 1334325 | Parachlamydiaceae bacterium isolate SSA5 chromosome | blastn | 20088 | 377 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydiaceae bacterium | ||
| 4804666 | 4804666 | PRJNA994052_P_NODE_70564_length_211_cov_2356.115942_g69308_i0 | PRJNA994052 | 70564 | 211 | 2356.115942 | 4971.40463762 | Polystyrenella longa | 2528007 | Bacteria | Bacteria | 226 | 1.0299999999999999e-54 | NTclustered | gi|1712652806|gb|CP036281.1| | 2528007 | g69308 | i0 | 86.7 | 47.1421800947867 | 203 | 27 | 96 | 0 | 6 | 208 | 1415677 | 1415475 | Polystyrenella longa strain Pla110 chromosome, complete genome | blastn | 9947 | 226 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Polystyrenella | Polystyrenella longa | |
| 6079432 | 6079432 | PRJNA994052_P_NODE_22365_length_303_cov_6.443478_g21137_i0 | PRJNA994052 | 22365 | 303 | 6.443478 | 19.52373834 | Polystyrenella longa | 2528007 | Bacteria | Bacteria | 110 | 1.65e-19 | NTclustered | gi|1712652806|gb|CP036281.1| | 2528007 | g21137 | i0 | 85.321 | 56.7887788778878 | 109 | 12 | 35 | 4 | 15 | 121 | 1415954 | 1415848 | Polystyrenella longa strain Pla110 chromosome, complete genome | blastn | 17207 | 110 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Polystyrenella | Polystyrenella longa | |
| 6079877 | 6079877 | PRJNA994052_P_NODE_63905_length_220_cov_63.027211_g62649_i0 | PRJNA994052 | 63905 | 220 | 63.027211 | 138.6598642 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 211 | 3.04e-50 | NTclustered | gi|1850852299|gb|CP053450.1| | 2026780 | g62649 | i0 | 85.644 | 3.82727272727273 | 202 | 27 | 91 | 2 | 16 | 215 | 719910 | 719709 | MAG: Planctomycetota bacterium isolate PNC22 chromosome | blastn | 842 | 211 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 6079952 | 6079952 | PRJNA994052_P_NODE_71425_length_210_cov_236.737226_g70169_i0 | PRJNA994052 | 71425 | 210 | 236.737226 | 497.1481746 | uncultured Planctomycetaceae bacterium | 100233 | Bacteria | Bacteria | 231 | 2.2099999999999997e-56 | NTclustered | gi|2874253757|emb|OY969698.1| | 100233 | g70169 | i0 | 87.192 | 29.8619047619048 | 203 | 26 | 97 | 0 | 2 | 204 | 4422887 | 4422685 | MAG: uncultured Planctomycetaceae bacterium isolate MFD00082.bin.2.56 genome assembly, chromosome: 1 | blastn | 6271 | 231 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | uncultured Planctomycetaceae bacterium | ||
| 6080035 | 6080035 | PRJNA994052_P_NODE_79485_length_201_cov_35.335938_g78228_i0 | PRJNA994052 | 79485 | 201 | 35.335938 | 71.02523538 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 222 | 1.26e-53 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g78228 | i0 | 87.065 | 3.82089552238806 | 201 | 20 | 98 | 6 | 6 | 201 | 3768213 | 3768412 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 768 | 222 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 7354578 | 7354578 | PRJNA994052_P_NODE_82106_length_198_cov_55.480000_g80849_i0 | PRJNA994052 | 82106 | 198 | 55.48 | 109.8504 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 171 | 4.54e-38 | NTclustered | gi|2874253749|emb|OY969623.1| | 1914239 | g80849 | i0 | 83.516 | 25.5606060606061 | 182 | 30 | 92 | 0 | 12 | 193 | 7050406 | 7050225 | MAG: uncultured Gemmataceae bacterium isolate MFD06742.bin.c.1 genome assembly, chromosome: 1 | blastn | 5061 | 171 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 8629469 | 8629469 | PRJNA994052_P_NODE_41967_length_255_cov_6.824176_g40720_i0 | PRJNA994052 | 41967 | 255 | 6.824176 | 17.4016488 | Oleiharenicola sp. Vm1 | 3398393 | Bacteria | Bacteria | 263 | 9.83e-66 | NTclustered | gi|2912653302|gb|CP180537.1| | 3398393 | g40720 | i0 | 85.49 | 5.42745098039216 | 255 | 33 | 99 | 4 | 3 | 255 | 1381445 | 1381697 | Oleiharenicola sp. Vm1 chromosome, complete genome | blastn | 1384 | 263 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Oleiharenicola | Oleiharenicola sp. Vm1 | |
| 9904412 | 9904412 | PRJNA994052_P_NODE_22368_length_303_cov_5.952174_g21140_i0 | PRJNA994052 | 22368 | 303 | 5.952174 | 18.03508722 | uncultured Opitutus sp. | 296825 | Bacteria | Bacteria | 339 | 1.93e-88 | NTclustered | gi|310754759|gb|HQ212649.1| | 296825 | g21140 | i0 | 86.557 | 50.5577557755776 | 305 | 23 | 96 | 12 | 8 | 299 | 866 | 567 | Uncultured Opitutus sp. clone 1_N02 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 15319 | 339 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | uncultured Opitutus sp. | |
| 11179846 | 11179846 | PRJNA994052_P_NODE_48289_length_244_cov_11.578947_g47037_i0 | PRJNA994052 | 48289 | 244 | 11.578947 | 28.25263068 | uncultured Chlamydiae bacterium | 305355 | Bacteria | Bacteria | 357 | 4.16e-94 | NTclustered | gi|2874254045|emb|OY970369.1| | 305355 | g47037 | i0 | 95.154 | 155.934426229508 | 227 | 9 | 93 | 2 | 19 | 244 | 174621 | 174396 | MAG: uncultured Chlamydiae bacterium isolate MFD06092.bin.1.176 genome assembly, chromosome: 1 | blastn | 38048 | 357 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | uncultured Chlamydiae bacterium | ||||
| 12455888 | 12455888 | PRJNA994052_P_NODE_65810_length_218_cov_8.041379_g64554_i0 | PRJNA994052 | 65810 | 218 | 8.041379 | 17.53020622 | Anatilimnocola aggregata | 2528021 | Bacteria | Bacteria | 110 | 1.13e-19 | NTclustered | gi|1712591889|gb|CP036274.1| | 2528021 | g64554 | i0 | 87.368 | 138.51376146789 | 95 | 12 | 44 | 0 | 115 | 209 | 7630886 | 7630980 | Anatilimnocola aggregata strain ETA_A8 chromosome, complete genome | blastn | 30196 | 110 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Anatilimnocola | Anatilimnocola aggregata | |
| 12752264 | 12752264 | PRJNA994052_P_NODE_18410_length_311_cov_29.945378_g17188_i0 | PRJNA994052 | 18410 | 311 | 29.945378 | 93.13012558 | Planctomycetia | 203683 | Bacteria | Bacteria | 176 | 1.65e-39 | NTclustered | gi|12583967|gb|AF245371.1|AF245371 | 149588 | g17188 | i0 | 88 | 101.1961414791 | 150 | 14 | 91 | 4 | 161 | 307 | 300 | 152 | Planctomycete str. 139 23S ribosomal RNA gene, partial sequence | blastn | 31472 | 176 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | planctomycete str. 139 | ||
| 13730079 | 13730079 | PRJNA994052_P_NODE_53391_length_235_cov_3559.271605_g52136_i0 | PRJNA994052 | 53391 | 235 | 3559.271605 | 8364.28827175 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 285 | 1.91e-72 | NTclustered | gi|2874254096|emb|OY970179.1| | 412056 | g52136 | i0 | 89.427 | 19.3489361702128 | 227 | 23 | 97 | 1 | 9 | 235 | 1729011 | 1729236 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05521.bin.c.1 genome assembly, chromosome: 1 | blastn | 4547 | 285 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 15004743 | 15004743 | PRJNA994052_P_NODE_72152_length_210_cov_6.160584_g70896_i0 | PRJNA994052 | 72152 | 210 | 6.160584 | 12.9372264 | Opitutales bacterium | 2026772 | Bacteria | Bacteria | 161 | 2.93e-35 | NTclustered | gi|2814788334|emb|OY762281.2| | 2026772 | g70896 | i0 | 81.818 | 87.8428571428571 | 198 | 30 | 92 | 5 | 4 | 196 | 976877 | 976681 | MAG: Opitutales bacterium isolate 685e4509-010e-4797-9872-a51ee4494a19 genome assembly, chromosome: 1 | blastn | 18447 | 161 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutales bacterium | |||
| 15004751 | 15004751 | PRJNA994052_P_NODE_73052_length_208_cov_304.533333_g71796_i0 | PRJNA994052 | 73052 | 208 | 304.533333 | 633.42933264 | Planctopirus ephydatiae | 2528019 | Bacteria | Bacteria | 150 | 6.28e-32 | NTclustered | gi|1712709119|gb|CP036299.1| | 2528019 | g71796 | i0 | 80.402 | 9.64423076923077 | 199 | 37 | 95 | 2 | 4 | 201 | 3939224 | 3939421 | Planctopirus ephydatiae strain spb1 chromosome, complete genome | blastn | 2006 | 150 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctopirus | Planctopirus ephydatiae | |
| 17554729 | 17554729 | PRJNA994052_P_NODE_78354_length_202_cov_91.798450_g77097_i0 | PRJNA994052 | 78354 | 202 | 91.79845 | 185.432869 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 235 | 1.6299999999999997e-57 | NTclustered | gi|2874253749|emb|OY969623.1| | 1914239 | g77097 | i0 | 88.601 | 52.3316831683168 | 193 | 22 | 96 | 0 | 10 | 202 | 7050195 | 7050387 | MAG: uncultured Gemmataceae bacterium isolate MFD06742.bin.c.1 genome assembly, chromosome: 1 | blastn | 10571 | 235 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 18828012 | 18828012 | PRJNA994052_P_NODE_24975_length_295_cov_8.581081_g23739_i0 | PRJNA994052 | 24975 | 295 | 8.581081 | 25.31418895 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 222 | 1.97e-53 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g23739 | i0 | 80.702 | 7.11864406779661 | 285 | 55 | 97 | 0 | 8 | 292 | 9270165 | 9269881 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 2100 | 222 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 18828218 | 18828218 | PRJNA994052_P_NODE_39355_length_260_cov_12.604278_g38109_i0 | PRJNA994052 | 39355 | 260 | 12.604278 | 32.7711228 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 337 | 5.839999999999998e-88 | NTclustered | gi|1927958621|gb|CP054186.1| | 2026777 | g38109 | i0 | 90.31 | 16.3576923076923 | 258 | 23 | 99 | 2 | 4 | 260 | 2649395 | 2649651 | MAG: Phycisphaeraceae bacterium isolate H1_PLA1 chromosome | blastn | 4253 | 337 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;