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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA994052" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 8 ✖

bioproject 1

  • PRJNA994052 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6079538 6079538 PRJNA994052_P_NODE_33305_length_273_cov_33.480000_g32061_i0 PRJNA994052 33305 273 33.48 91.4004 Perichaena dictyonema 2951132 Evosea other_Eukaryota 497 2.68e-136   NTclustered gi|2250222210|gb|ON713340.1| 2951132 g32061 i0 99.632 96.3626373626374 272 1 99 0 1 272 1176 905 Perichaena dictyonema voucher MA59057 small subunit ribosomal RNA gene, partial sequence blastn 26307 497 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Trichiida Trichiidae Perichaena Perichaena dictyonema
10201704 10201704 PRJNA994052_P_NODE_27788_length_287_cov_148.299065_g26547_i0 PRJNA994052 27788 287 148.299065 425.61831655 Stemonitidae 137615 Evosea other_Eukaryota 486 6.139999999999999e-133   NTclustered gi|5712220|gb|AF093247.1|AF093247 101284 g26547 i0 98.897 94.5296167247387 272 3 95 0 10 281 1006 1277 Hyperamoeba sp. ATCC50750 small subunit ribosomal RNA gene, complete sequence blastn 27130 490 0.991836734693878 Eukaryota Amoebozoa   Evosea Eumycetozoa     Hyperamoeba Hyperamoeba sp. ATCC50750
12752270 12752270 PRJNA994052_P_NODE_19270_length_310_cov_30.738397_g18047_i0 PRJNA994052 19270 310 30.738397 95.2890307 Polyschismium 2986373 Root_unresolved Root_unresolved 243 1.6000000000000004e-59   NTclustered gi|2651357789|gb|PP174304.1| 1892891 g18047 i0 98.54 43.9516129032258 137 2 44 0 162 298 3294 3430 Amoebozoa sp. isolate 114_WLI small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 13625 243 1 Eukaryota Amoebozoa             Amoebozoa sp.
19124363 19124363 PRJNA994052_P_NODE_27035_length_289_cov_146.342593_g25795_i0 PRJNA994052 27035 289 146.342593 422.93009377 Stemonitidae 137615 Evosea other_Eukaryota 497 2.8599999999999998e-136   NTclustered gi|5712220|gb|AF093247.1|AF093247 101284 g25795 i0 99.632 93.9411764705882 272 1 94 0 9 280 1277 1006 Hyperamoeba sp. ATCC50750 small subunit ribosomal RNA gene, complete sequence blastn 27149 501 0.992015968063872 Eukaryota Amoebozoa   Evosea Eumycetozoa     Hyperamoeba Hyperamoeba sp. ATCC50750
20103371 20103371 PRJNA994052_P_NODE_80436_length_200_cov_32.330709_g79179_i0 PRJNA994052 80436 200 32.330709 64.661418 Thecochaos fibrillosum 2789656 Discosea other_Eukaryota 65.8 2.23e-6   NTclustered gi|1932887129|gb|MW261337.1| 2789656 g79179 i0 100 16.245 35 0 18 0 21 55 616 582 Thecochaos fibrillosum isolate Tch small subunit ribosomal RNA gene, partial sequence blastn 3249 65.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Thecochaos Thecochaos fibrillosum
21378846 21378846 PRJNA994052_P_NODE_61817_length_223_cov_37.206667_g60561_i0 PRJNA994052 61817 223 37.206667 82.97086741 uncultured Rhizamoeba 1260765 Tubulinea other_Eukaryota 211 3.09e-50   NTclustered gi|511487963|gb|JX898537.1| 1260765 g60561 i0 90.184 6.62780269058296 163 14 73 2 62 223 401 240 Uncultured Rhizamoeba clone HCA_D03-34 28S ribosomal RNA gene, partial sequence blastn 1478 211 1 Eukaryota Amoebozoa   Tubulinea Elardia Leptomyxida Flabellulidae   uncultured Rhizamoeba
23929262 23929262 PRJNA994052_P_NODE_68539_length_214_cov_38.645390_g67283_i0 PRJNA994052 68539 214 38.64539 82.7011346 uncultured Amoebozoa 590481 Root_unresolved Root_unresolved 104 5.13e-18   NTclustered gi|221185864|gb|FJ577811.1| 590481 g67283 i0 98.305 24.1775700934579 59 1 28 0 155 213 574 516 Uncultured Amoebozoa clone Ivry07 18S ribosomal RNA gene, partial sequence blastn 5174 104 1 Eukaryota Amoebozoa             uncultured Amoebozoa
25203009 25203009 PRJNA994052_P_NODE_81240_length_199_cov_45.031746_g79983_i0 PRJNA994052 81240 199 45.031746 89.61317454 Thecamoeba similis 242545 Discosea other_Eukaryota 187 4.54e-43   NTclustered gi|33946350|gb|AY294154.1| 242545 g79983 i0 91.304 67.427135678392 138 11 69 1 55 191 1162 1025 Thecamoeba similis actin mRNA, complete cds blastn 13418 187 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Thecamoeba Thecamoeba similis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;