RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA993416" and tax_phylum = "Cyanobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Cyanobacteriota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA993416 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11476579 11476579 PRJNA993416_P_NODE_10629_length_268_cov_1.579487_g10524_i0 PRJNA993416 10629 268 1.579487 4.23302516 Chlorogloeopsis 1123 Bacteria Bacteria 213 1.06e-50   NTclustered gi|2830894453|gb|CP170743.1| 184925 g10524 i0 83.406 1.7089552238806 229 38 85 0 3 231 4445425 4445197 Chlorogloeopsis fritschii PCC 9212 chromosome, complete genome blastn 458 213 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Chlorogloeopsidaceae Chlorogloeopsis Chlorogloeopsis fritschii
15003932 15003932 PRJNA993416_P_NODE_5812_length_345_cov_2.805147_g5707_i0 PRJNA993416 5812 345 2.805147 9.67775715 Gloeobacter morelensis 2907343 Bacteria Bacteria 230 1.4099999999999995e-55   NTclustered gi|2157147181|gb|CP063845.1| 2781736 g5707 i0 78.902 70.5101449275362 346 68 99 5 4 345 706394 706738 Gloeobacter morelensis MG652769, complete genome blastn 24326 230 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Gloeobacterales Gloeobacteraceae Gloeobacter Gloeobacter morelensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;