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contig_metadata

15 rows where analysis = "blastn", bioproject = "PRJNA993416" and tax_phylum = "Chlorophyta"

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tax_superkingdom 1

tax_phylum 1

  • Chlorophyta · 15 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA993416 · 15 ✖

analysis 1

  • blastn · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
976046 976046 PRJNA993416_P_NODE_9841_length_276_cov_1.137931_g9736_i0 PRJNA993416 9841 276 1.137931 3.14068956 Paradoxia multiseta 249350 Plants Plants 436 5.999999999999999e-118   NTclustered gi|723457039|ref|NC_025540.1| 249350 g9736 i0 98.776 2.32971014492754 245 3 99 0 1 245 88620 88864 Paradoxia multiseta culture-collection SAG:18.84 chloroplast, complete genome blastn 643 436 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Paradoxia Paradoxia multiseta
4803922 4803922 PRJNA993416_P_NODE_7744_length_296_cov_3.076233_g7639_i0 PRJNA993416 7744 296 3.076233 9.10564968 Coccomyxa subellipsoidea 248742 Plants Plants 124 5.74e-24   NTclustered gi|545363291|ref|XM_005646727.1| 574566 g7639 i0 88.462 1.68918918918919 104 10 35 2 145 247 832 730 Coccomyxa subellipsoidea C-169 ENTH-domain-containing protein partial mRNA blastn 500 124 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
6079265 6079265 PRJNA993416_P_NODE_9645_length_277_cov_1.509804_g9540_i0 PRJNA993416 9645 277 1.509804 4.18215708 Coccomyxa subellipsoidea 248742 Plants Plants 292 1.38e-74   NTclustered gi|545370123|ref|XM_005649674.1| 574566 g9540 i0 88.983 0.851985559566787 236 26 85 0 8 243 1300 1065 Coccomyxa subellipsoidea C-169 hypothetical protein mRNA blastn 236 292 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
7353530 7353530 PRJNA993416_P_NODE_11566_length_259_cov_1.596774_g11461_i0 PRJNA993416 11566 259 1.596774 4.13564466 Coccomyxa subellipsoidea 248742 Plants Plants 86.1 2.33e-12   NTclustered gi|545365777|ref|XM_005647776.1| 574566 g11461 i0 79.528 0.49034749034749 127 20 48 4 107 230 4703 4826 Coccomyxa subellipsoidea C-169 hypothetical protein partial mRNA blastn 127 86.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
9903974 9903974 PRJNA993416_P_NODE_12768_length_250_cov_0.870056_g12663_i0 PRJNA993416 12768 250 0.870056 2.17514 Coccomyxa sp. Obi 2315456 Plants Plants 303 5.66e-78   NTclustered gi|2106301938|dbj|AP025008.1| 2315456 g12663 i0 94.444 39.104 198 10 79 1 29 225 77533 77336 Coccomyxa sp. Obi chloroplast DNA, complete genome blastn 9776 303 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa sp. Obi
10201547 10201547 PRJNA993416_P_NODE_10508_length_269_cov_1.571429_g10403_i0 PRJNA993416 10508 269 1.571429 4.22714401 Chlorophyceae 3166 Plants Plants 163 1.09e-35   NTclustered gi|2082244575|ref|XM_043061686.1| 3055 g10403 i0 81.068 2.58736059479554 206 37 76 2 65 269 806 1010 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_04g215400v5), mRNA blastn 696 163 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
11179365 11179365 PRJNA993416_P_NODE_8449_length_287_cov_1.443925_g8344_i0 PRJNA993416 8449 287 1.443925 4.14406475 Coccomyxa subellipsoidea 248742 Plants Plants 178 4.2e-40   NTclustered gi|545359931|ref|XM_005645330.1| 574566 g8344 i0 89.928 0.937282229965157 139 12 48 2 21 158 790 927 Coccomyxa subellipsoidea C-169 coatomer protein complex, beta prime partial mRNA blastn 269 178 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
12454959 12454959 PRJNA993416_P_NODE_13250_length_249_cov_0.875000_g13145_i0 PRJNA993416 13250 249 0.875 2.17875 Coccomyxa subellipsoidea 248742 Plants Plants 193 1.27e-44   NTclustered gi|545359095|ref|XM_005644987.1| 574566 g13145 i0 88.199 0.646586345381526 161 19 65 0 25 185 2018 1858 Coccomyxa subellipsoidea C-169 P-loop containing nucleoside triphosphate hydrolase protein mRNA blastn 161 193 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
12455089 12455089 PRJNA993416_P_NODE_4170_length_412_cov_1.749263_g4065_i0 PRJNA993416 4170 412 1.749263 7.20696356 Coccomyxa subellipsoidea 248742 Plants Plants 187 1.0399999999999997e-42   NTclustered gi|545354972|ref|XM_005643250.1| 574566 g4065 i0 88.816 0.368932038834951 152 17 37 0 88 239 707 556 Coccomyxa subellipsoidea C-169 hypothetical protein partial mRNA blastn 152 187 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
17553727 17553727 PRJNA993416_P_NODE_15894_length_242_cov_0.911243_g15789_i0 PRJNA993416 15894 242 0.911243 2.20520806 Paradoxia multiseta 249350 Plants Plants 270 5.53e-68   NTclustered gi|723457039|ref|NC_025540.1| 249350 g15789 i0 86.777 84.7272727272727 242 32 100 0 1 242 171551 171792 Paradoxia multiseta culture-collection SAG:18.84 chloroplast, complete genome blastn 20504 270 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Paradoxia Paradoxia multiseta
18827516 18827516 PRJNA993416_P_NODE_10915_length_265_cov_2.395833_g10810_i0 PRJNA993416 10915 265 2.395833 6.34895745 Coccomyxa subellipsoidea 248742 Plants Plants 121 6.55e-23   NTclustered gi|545368768|ref|XM_005649103.1| 574566 g10810 i0 82.069 0.547169811320755 145 22 54 3 81 223 1763 1621 Coccomyxa subellipsoidea C-169 hypothetical protein partial mRNA blastn 145 121 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
22652865 22652865 PRJNA993416_P_NODE_13718_length_247_cov_1.873563_g13613_i0 PRJNA993416 13718 247 1.873563 4.62770061 Paradoxia multiseta 249350 Plants Plants 278 3.3800000000000004e-70   NTclustered gi|723457039|ref|NC_025540.1| 249350 g13613 i0 90.521 13.6072874493927 211 18 85 2 37 247 15127 15335 Paradoxia multiseta culture-collection SAG:18.84 chloroplast, complete genome blastn 3361 278 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Paradoxia Paradoxia multiseta
23928287 23928287 PRJNA993416_P_NODE_11159_length_263_cov_1.600000_g11054_i0 PRJNA993416 11159 263 1.6 4.208 Paradoxia multiseta 249350 Plants Plants 481 2.58e-131   NTclustered gi|723457039|ref|NC_025540.1| 249350 g11054 i0 99.62 3 263 1 100 0 1 263 66046 66308 Paradoxia multiseta culture-collection SAG:18.84 chloroplast, complete genome blastn 789 481 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Paradoxia Paradoxia multiseta
23928559 23928559 PRJNA993416_P_NODE_8939_length_283_cov_1.685714_g8834_i0 PRJNA993416 8939 283 1.685714 4.77057062 Coccomyxa subellipsoidea 248742 Plants Plants 254 6.67e-63   NTclustered gi|545370403|ref|XM_005649787.1| 574566 g8834 i0 93.529 0.600706713780919 170 11 60 0 16 185 1520 1351 Coccomyxa subellipsoidea C-169 TBC-domain-containing protein partial mRNA blastn 170 254 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
25202177 25202177 PRJNA993416_P_NODE_9900_length_275_cov_1.480198_g9795_i0 PRJNA993416 9900 275 1.480198 4.0705445 Chlorella variabilis 554065 Plants Plants 76.8 1.5e-9   NTclustered gi|552843909|ref|XM_005850898.1| 554065 g9795 i0 84.615 0.283636363636364 78 11 28 1 199 275 793 870 Chlorella variabilis hypothetical protein (CHLNCDRAFT_19459) mRNA, complete cds blastn 78 76.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;