RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA986547" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA986547 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10200923 10200923 PRJNA986547_P_NODE_7248_length_259_cov_4.193548_g7166_i0 PRJNA986547 7248 259 4.193548 10.86128932 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 309 1.2700000000000002e-79   NTclustered gi|330795360|ref|XM_003285694.1| 5786 g7166 i0 88.372 98.9305019305019 258 28 99 2 1 257 872 616 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_91566), mRNA blastn 25623 309 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
15002069 15002069 PRJNA986547_P_NODE_15272_length_216_cov_4.321678_g15190_i0 PRJNA986547 15272 216 4.321678 9.33482448 Heterostelium album 2086695 Evosea other_Eukaryota 95.3 3.12e-15   NTclustered gi|1160570464|ref|XM_020574726.1| 670386 g15190 i0 92.424 0.513888888888889 66 5 31 0 134 199 365 430 Polysphondylium pallidum PN500 hypothetical protein partial mRNA blastn 111 95.3 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;