RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA986547" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA986547 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2249491 2249491 PRJNA986547_P_NODE_6342_length_266_cov_3.186528_g6260_i0 PRJNA986547 6342 266 3.186528 8.47616448 Anaerolineales bacterium 2073117 Bacteria Bacteria 363 9.889999999999997e-96   NTclustered gi|2556903179|gb|CP129482.1| 2073117 g6260 i0 91.386 219.488721804511 267 19 99 4 2 266 3066853 3067117 MAG: Anaerolineales bacterium isolate cMAG.14 chromosome, complete genome blastn 58384 363 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
3524734 3524734 PRJNA986547_P_NODE_3123_length_310_cov_2.721519_g3041_i0 PRJNA986547 3123 310 2.721519 8.4367089 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 117 1.0100000000000002e-21   NTclustered gi|2874253812|emb|OY969796.1| 1672391 g3041 i0 80.795 21.2096774193548 151 27 48 2 1 150 3119221 3119370 MAG: uncultured Chloroflexia bacterium isolate MFD01872.bin.1.103 genome assembly, chromosome: 1 blastn 6575 117 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
9902357 9902357 PRJNA986547_P_NODE_2448_length_314_cov_1.278008_g2366_i0 PRJNA986547 2448 314 1.278008 4.01294512 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 346 1.1999999999999999e-90   NTclustered gi|2874254132|emb|OY970217.1| 1672391 g2366 i0 86.709 265.420382165605 316 36 100 4 1 314 3521680 3521991 MAG: uncultured Chloroflexia bacterium isolate MFD05684.bin.1.130 genome assembly, chromosome: 1 blastn 83342 346 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;