contig_metadata
21 rows where analysis = "blastn", bioproject = "PRJNA986481" and tax_phylum = "Verrucomicrobiota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2249291 | 2249291 | PRJNA986481_P_NODE_9522_length_529_cov_19.095833_g9003_i0 | PRJNA986481 | 9522 | 529 | 19.095833 | 101.01695657 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 706 | 0 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g9003 | i0 | 91.813 | 74.9848771266541 | 513 | 33 | 96 | 8 | 1 | 509 | 1315424 | 1314917 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 39667 | 706 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 3523904 | 3523904 | PRJNA986481_P_NODE_1863_length_1045_cov_68.939759_g352_i3 | PRJNA986481 | 1863 | 1045 | 68.939759 | 720.42048155 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 1218 | 0 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g352 | i3 | 89.228 | 162.977033492823 | 984 | 93 | 93 | 10 | 41 | 1017 | 1316491 | 1315514 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 170311 | 1218 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 4801325 | 4801325 | PRJNA986481_P_NODE_26644_length_318_cov_1.724907_g26119_i0 | PRJNA986481 | 26644 | 318 | 1.724907 | 5.48520426 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 375 | 1.5599999999999995e-99 | NTclustered | gi|2874253779|emb|OY969763.1| | 412056 | g26119 | i0 | 88.125 | 51.1792452830189 | 320 | 33 | 100 | 5 | 1 | 318 | 3833122 | 3833438 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.c.2 genome assembly, chromosome: 1 | blastn | 16275 | 375 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 6376103 | 6376103 | PRJNA986481_P_NODE_1705_length_1076_cov_6.920156_g736_i2 | PRJNA986481 | 1705 | 1076 | 6.920156 | 74.46087856 | Opitutaceae | 134623 | Bacteria | Bacteria | 1090 | 0 | NTclustered | gi|470483113|ref|NR_076574.1| | 107709 | g736 | i2 | 88.116 | 95.3066914498141 | 934 | 89 | 86 | 15 | 150 | 1076 | 1422 | 504 | Opitutus terrae strain PB90-1 23S ribosomal RNA gene, complete sequence | blastn | 102550 | 1090 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus terrae | |
| 6376145 | 6376145 | PRJNA986481_P_NODE_2645_length_911_cov_7.353828_g736_i3 | PRJNA986481 | 2645 | 911 | 7.353828 | 66.99337308 | Verrucomicrobiota | 74201 | Bacteria | Bacteria | 1360 | 0 | NTclustered | gi|470483113|ref|NR_076574.1| | 107709 | g736 | i3 | 93.64 | 136.252469813392 | 912 | 54 | 100 | 4 | 1 | 911 | 504 | 1412 | Opitutus terrae strain PB90-1 23S ribosomal RNA gene, complete sequence | blastn | 124126 | 1360 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus terrae | |
| 8626951 | 8626951 | PRJNA986481_P_NODE_59687_length_241_cov_3.609375_g59162_i0 | PRJNA986481 | 59687 | 241 | 3.609375 | 8.69859375 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 267 | 7.12e-67 | NTclustered | gi|2621704341|emb|OY760937.1| | 2499141 | g59162 | i0 | 88.688 | 175.626556016598 | 221 | 22 | 91 | 3 | 1 | 220 | 3989885 | 3989667 | MAG: Verrucomicrobiae bacterium isolate 066a7682-a1ac-48de-8761-1470dc9e5c3e genome assembly, chromosome: 1 | blastn | 42326 | 267 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 9902227 | 9902227 | PRJNA986481_P_NODE_9508_length_530_cov_1.767152_g8989_i0 | PRJNA986481 | 9508 | 530 | 1.767152 | 9.3659056 | Luteolibacter sp. Populi | 3230487 | Bacteria | Bacteria | 339 | 3.5699999999999995e-88 | NTclustered | gi|2774618348|gb|CP161812.1| | 3230487 | g8989 | i0 | 82.443 | 1.74150943396226 | 393 | 63 | 73 | 4 | 2 | 388 | 5716299 | 5715907 | Luteolibacter sp. Populi chromosome, complete genome | blastn | 923 | 339 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. Populi | |
| 11177068 | 11177068 | PRJNA986481_P_NODE_44249_length_259_cov_0.961905_g43724_i0 | PRJNA986481 | 44249 | 259 | 0.961905 | 2.49133395 | Luteolibacter luteus | 2728835 | Bacteria | Bacteria | 318 | 2.11e-82 | NTclustered | gi|1835317346|gb|CP051774.1| | 2728835 | g43724 | i0 | 88.889 | 22.2895752895753 | 261 | 25 | 100 | 4 | 1 | 259 | 2316408 | 2316150 | Luteolibacter luteus strain G-1-1-1 chromosome, complete genome | blastn | 5773 | 318 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter luteus | |
| 11177246 | 11177246 | PRJNA986481_P_NODE_55089_length_246_cov_27.812183_g54564_i0 | PRJNA986481 | 55089 | 246 | 27.812183 | 68.41797018 | Oleiharenicola sp. Vm1 | 3398393 | Bacteria | Bacteria | 351 | 1.96e-92 | NTclustered | gi|2912653302|gb|CP180537.1| | 3398393 | g54564 | i0 | 94.69 | 82.0243902439024 | 226 | 12 | 92 | 0 | 1 | 226 | 3557830 | 3558055 | Oleiharenicola sp. Vm1 chromosome, complete genome | blastn | 20178 | 351 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Oleiharenicola | Oleiharenicola sp. Vm1 | |
| 12452941 | 12452941 | PRJNA986481_P_NODE_450_length_1631_cov_48.512010_g352_i0 | PRJNA986481 | 450 | 1631 | 48.51201 | 791.2308831 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 1881 | 0 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g352 | i0 | 88.306 | 156.315757204169 | 1582 | 167 | 96 | 15 | 41 | 1611 | 1316491 | 1314917 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 254951 | 1881 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 13726837 | 13726837 | PRJNA986481_P_NODE_12671_length_460_cov_8.381995_g12147_i0 | PRJNA986481 | 12671 | 460 | 8.381995 | 38.557177 | Opitutaceae bacterium TAV5 | 794903 | Bacteria | Bacteria | 56.5 | 0.003 | NTclustered | gi|573471959|gb|CP007053.1| | 794903 | g12147 | i0 | 100 | 0.132608695652174 | 30 | 0 | 7 | 0 | 71 | 100 | 2857683 | 2857712 | Opitutaceae bacterium TAV5, complete genome | blastn | 61 | 56.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium TAV5 | ||
| 13727653 | 13727653 | PRJNA986481_P_NODE_911_length_1348_cov_9.161663_g736_i0 | PRJNA986481 | 911 | 1348 | 9.161663 | 123.49921724 | Oleiharenicola sp. Vm1 | 3398393 | Bacteria | Bacteria | 2102 | 0 | NTclustered | gi|2912653302|gb|CP180537.1| | 3398393 | g736 | i0 | 94.819 | 87.799703264095 | 1351 | 64 | 100 | 5 | 1 | 1348 | 3556184 | 3557531 | Oleiharenicola sp. Vm1 chromosome, complete genome | blastn | 118354 | 2102 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Oleiharenicola | Oleiharenicola sp. Vm1 | |
| 15001094 | 15001094 | PRJNA986481_P_NODE_1052_length_1274_cov_12.088980_g736_i1 | PRJNA986481 | 1052 | 1274 | 12.08898 | 154.0136052 | Lacunisphaera limnophila | 1838286 | Bacteria | Bacteria | 1973 | 0 | NTclustered | gi|1070531674|gb|CP016094.1| | 1838286 | g736 | i1 | 94.662 | 89.2794348508634 | 1274 | 64 | 99 | 3 | 3 | 1274 | 2557994 | 2556723 | Lacunisphaera limnophila strain IG16b, complete genome | blastn | 113742 | 1973 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Lacunisphaera | Lacunisphaera limnophila | |
| 15001398 | 15001398 | PRJNA986481_P_NODE_28432_length_307_cov_3.879845_g27907_i0 | PRJNA986481 | 28432 | 307 | 3.879845 | 11.91112415 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 529 | 1.0899999999999996e-145 | NTclustered | gi|511202471|gb|KC994702.1| | 156588 | g27907 | i0 | 97.72 | 99.599348534202 | 307 | 7 | 100 | 0 | 1 | 307 | 1438 | 1132 | Uncultured Verrucomicrobia bacterium clone BF 022 16S ribosomal RNA gene, partial sequence | blastn | 30577 | 529 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 15299972 | 15299972 | PRJNA986481_P_NODE_31712_length_290_cov_1.983402_g31187_i0 | PRJNA986481 | 31712 | 290 | 1.983402 | 5.7518658 | Bacteria | 2 | Bacteria | Bacteria | 263 | 1.14e-65 | NTclustered | gi|2874253952|emb|OY970277.1| | 412056 | g31187 | i0 | 89.252 | 61.7931034482759 | 214 | 18 | 73 | 5 | 1 | 211 | 2749648 | 2749859 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.1.45 genome assembly, chromosome: 1 | blastn | 17920 | 263 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 17551932 | 17551932 | PRJNA986481_P_NODE_9014_length_542_cov_81.981744_g352_i4 | PRJNA986481 | 9014 | 542 | 81.981744 | 444.34105248 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 662 | 0 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g352 | i4 | 90.514 | 85.7214022140221 | 506 | 41 | 93 | 5 | 41 | 542 | 1316491 | 1315989 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 46461 | 662 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 18825329 | 18825329 | PRJNA986481_P_NODE_34975_length_276_cov_1.841410_g34450_i0 | PRJNA986481 | 34975 | 276 | 1.84141 | 5.0822916 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 368 | 2.22e-97 | NTclustered | gi|2874253779|emb|OY969763.1| | 412056 | g34450 | i0 | 90.714 | 28.0652173913043 | 280 | 20 | 100 | 6 | 1 | 276 | 3832757 | 3832480 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.c.2 genome assembly, chromosome: 1 | blastn | 7746 | 368 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 18825495 | 18825495 | PRJNA986481_P_NODE_455_length_1625_cov_72.541878_g352_i1 | PRJNA986481 | 455 | 1625 | 72.541878 | 1178.8055175 | Fontisphaera persica | 2974023 | Bacteria | Bacteria | 1659 | 0 | NTclustered | gi|2439237958|gb|CP116615.1| | 2974023 | g352 | i1 | 85.599 | 133.198769230769 | 1611 | 199 | 98 | 28 | 22 | 1611 | 3861031 | 3862629 | Fontisphaera persica strain B-154 chromosome, complete genome | blastn | 216448 | 1659 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Limisphaerales | Fontisphaeraceae | Fontisphaera | Fontisphaera persica | |
| 18825820 | 18825820 | PRJNA986481_P_NODE_9595_length_527_cov_10.991632_g9076_i0 | PRJNA986481 | 9595 | 527 | 10.991632 | 57.92590064 | Prosthecobacter fusiformis | 48464 | Bacteria | Bacteria | 584 | 4.119999999999998e-162 | NTclustered | gi|12583974|gb|AF245378.1|AF245378 | 48464 | g9076 | i0 | 87.698 | 175.764705882353 | 504 | 58 | 95 | 3 | 1 | 502 | 503 | 2 | Prosthecobacter fusiformis 23S ribosomal RNA gene, partial sequence | blastn | 92628 | 584 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter fusiformis | |
| 21375925 | 21375925 | PRJNA986481_P_NODE_49517_length_253_cov_0.990196_g48992_i0 | PRJNA986481 | 49517 | 253 | 0.990196 | 2.50519588 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 202 | 2.15e-47 | NTclustered | gi|2874253952|emb|OY970277.1| | 412056 | g48992 | i0 | 88.957 | 34.7667984189723 | 163 | 18 | 64 | 0 | 19 | 181 | 4127480 | 4127318 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.1.45 genome assembly, chromosome: 1 | blastn | 8796 | 202 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 22650820 | 22650820 | PRJNA986481_P_NODE_458_length_1623_cov_46.689327_g352_i2 | PRJNA986481 | 458 | 1623 | 46.689327 | 757.76777721 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 1714 | 0 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g352 | i2 | 86.519 | 133.920517560074 | 1580 | 187 | 96 | 22 | 41 | 1602 | 1316491 | 1314920 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 217353 | 1714 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;