contig_metadata
17 rows where analysis = "blastn", bioproject = "PRJNA986481" and tax_phylum = "Planctomycetota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 973537 | 973537 | PRJNA986481_P_NODE_34221_length_279_cov_2.378261_g33696_i0 | PRJNA986481 | 34221 | 279 | 2.378261 | 6.63534819 | Urbifossiella limnaea | 2528023 | Bacteria | Bacteria | 435 | 2.18e-117 | NTclustered | gi|1712585314|gb|CP036273.1| | 2528023 | g33696 | i0 | 94.681 | 130.286738351254 | 282 | 11 | 100 | 4 | 1 | 279 | 2018960 | 2019240 | Urbifossiella limnaea strain ETA_A1 chromosome, complete genome | blastn | 36350 | 435 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Urbifossiella | Urbifossiella limnaea | |
| 3524410 | 3524410 | PRJNA986481_P_NODE_5303_length_690_cov_5.115445_g4865_i0 | PRJNA986481 | 5303 | 690 | 5.115445 | 35.2965705 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 730 | 0 | NTclustered | gi|1927958621|gb|CP054186.1| | 2026777 | g4865 | i0 | 86.391 | 118.131884057971 | 676 | 82 | 97 | 10 | 1 | 672 | 1866868 | 1866199 | MAG: Phycisphaeraceae bacterium isolate H1_PLA1 chromosome | blastn | 81511 | 730 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 4801482 | 4801482 | PRJNA986481_P_NODE_36804_length_268_cov_3.470320_g36279_i0 | PRJNA986481 | 36804 | 268 | 3.47032 | 9.3004576 | Urbifossiella limnaea | 2528023 | Bacteria | Bacteria | 387 | 5.92e-103 | NTclustered | gi|1712585314|gb|CP036273.1| | 2528023 | g36279 | i0 | 94.444 | 115.436567164179 | 252 | 12 | 94 | 2 | 18 | 268 | 4212569 | 4212319 | Urbifossiella limnaea strain ETA_A1 chromosome, complete genome | blastn | 30937 | 387 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Urbifossiella | Urbifossiella limnaea | |
| 4801883 | 4801883 | PRJNA986481_P_NODE_624_length_1505_cov_372.283654_g486_i1 | PRJNA986481 | 624 | 1505 | 372.283654 | 5602.8689927 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 1823 | 0 | NTclustered | gi|1927958621|gb|CP054186.1| | 2026777 | g486 | i1 | 89.053 | 283.415946843854 | 1489 | 137 | 98 | 22 | 17 | 1489 | 1867669 | 1866191 | MAG: Phycisphaeraceae bacterium isolate H1_PLA1 chromosome | blastn | 426541 | 1823 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 7350976 | 7350976 | PRJNA986481_P_NODE_11706_length_479_cov_2.183721_g11183_i0 | PRJNA986481 | 11706 | 479 | 2.183721 | 10.46002359 | Tautonia plasticadhaerens | 2527974 | Bacteria | Bacteria | 414 | 5.16e-111 | NTclustered | gi|1712713678|gb|CP036426.1| | 2527974 | g11183 | i0 | 85.859 | 1.30688935281837 | 396 | 48 | 82 | 6 | 87 | 478 | 1121110 | 1121501 | Tautonia plasticadhaerens strain ElP chromosome | blastn | 626 | 414 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Tautonia | Tautonia plasticadhaerens | |
| 9901838 | 9901838 | PRJNA986481_P_NODE_41988_length_261_cov_1.264151_g41463_i0 | PRJNA986481 | 41988 | 261 | 1.264151 | 3.29943411 | Rubinisphaera brasiliensis | 119 | Bacteria | Bacteria | 52.8 | 0.024 | NTclustered | gi|324966854|gb|CP002546.1| | 756272 | g41463 | i0 | 100 | 0.10727969348659 | 28 | 0 | 11 | 0 | 228 | 255 | 678723 | 678750 | Rubinisphaera brasiliensis DSM 5305 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Rubinisphaera | Rubinisphaera brasiliensis | |
| 9902116 | 9902116 | PRJNA986481_P_NODE_58708_length_243_cov_0.917526_g58183_i0 | PRJNA986481 | 58708 | 243 | 0.917526 | 2.22958818 | Planctomycetales bacterium ZRK34 | 2723666 | Bacteria | Bacteria | 235 | 2.03e-57 | NTclustered | gi|1898316769|gb|CP050848.1| | 2723666 | g58183 | i0 | 86.73 | 67.8395061728395 | 211 | 28 | 87 | 0 | 31 | 241 | 5655049 | 5654839 | Planctomycetales bacterium ZRK34 chromosome, complete genome | blastn | 16485 | 235 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetales bacterium ZRK34 | |||
| 13727599 | 13727599 | PRJNA986481_P_NODE_631_length_1502_cov_287.187887_g489_i1 | PRJNA986481 | 631 | 1502 | 287.187887 | 4313.56206274 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 1543 | 0 | NTclustered | gi|1927958621|gb|CP054186.1| | 2026777 | g489 | i1 | 85.87 | 455.456058588549 | 1465 | 189 | 97 | 15 | 17 | 1470 | 1867669 | 1866212 | MAG: Phycisphaeraceae bacterium isolate H1_PLA1 chromosome | blastn | 684095 | 1543 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 16276771 | 16276771 | PRJNA986481_P_NODE_56853_length_245_cov_1.020408_g56328_i0 | PRJNA986481 | 56853 | 245 | 1.020408 | 2.4999996 | Stieleria neptunia | 2527979 | Bacteria | Bacteria | 60.2 | 1.32e-4 | NTclustered | gi|1712721777|gb|CP037423.1| | 2527979 | g56328 | i0 | 97.143 | 0.142857142857143 | 35 | 1 | 14 | 0 | 211 | 245 | 2671186 | 2671152 | Stieleria neptunia strain Enr13 chromosome | blastn | 35 | 60.2 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Stieleria | Stieleria neptunia | |
| 20099894 | 20099894 | PRJNA986481_P_NODE_2596_length_918_cov_60.803222_g2265_i0 | PRJNA986481 | 2596 | 918 | 60.803222 | 558.17357796 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 861 | 0 | NTclustered | gi|2076441902|gb|CP075368.1| | 2026777 | g2265 | i0 | 84.589 | 210.652505446623 | 876 | 125 | 95 | 9 | 48 | 918 | 2584428 | 2583558 | MAG: Phycisphaeraceae bacterium isolate ACE_PLA2 chromosome | blastn | 193379 | 861 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 20099980 | 20099980 | PRJNA986481_P_NODE_30876_length_294_cov_1.820408_g30351_i0 | PRJNA986481 | 30876 | 294 | 1.820408 | 5.35199952 | Urbifossiella limnaea | 2528023 | Bacteria | Bacteria | 472 | 1.7699999999999998e-128 | NTclustered | gi|1712585314|gb|CP036273.1| | 2528023 | g30351 | i0 | 95.578 | 62.5680272108844 | 294 | 13 | 100 | 0 | 1 | 294 | 2020320 | 2020027 | Urbifossiella limnaea strain ETA_A1 chromosome, complete genome | blastn | 18395 | 472 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Urbifossiella | Urbifossiella limnaea | |
| 20100242 | 20100242 | PRJNA986481_P_NODE_4796_length_719_cov_2.541791_g4373_i0 | PRJNA986481 | 4796 | 719 | 2.541791 | 18.27547729 | Urbifossiella limnaea | 2528023 | Bacteria | Bacteria | 1114 | 0 | NTclustered | gi|1712585314|gb|CP036273.1| | 2528023 | g4373 | i0 | 94.606 | 403.13769123783 | 723 | 33 | 100 | 6 | 1 | 719 | 2018233 | 2018953 | Urbifossiella limnaea strain ETA_A1 chromosome, complete genome | blastn | 289856 | 1114 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Urbifossiella | Urbifossiella limnaea | |
| 20100458 | 20100458 | PRJNA986481_P_NODE_616_length_1507_cov_696.316187_g486_i0 | PRJNA986481 | 616 | 1507 | 696.316187 | 10493.48493809 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 1941 | 0 | NTclustered | gi|1927958621|gb|CP054186.1| | 2026777 | g486 | i0 | 90.451 | 381.806237558062 | 1487 | 122 | 98 | 16 | 17 | 1491 | 1866191 | 1867669 | MAG: Phycisphaeraceae bacterium isolate H1_PLA1 chromosome | blastn | 575382 | 1941 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 21375719 | 21375719 | PRJNA986481_P_NODE_3697_length_796_cov_6.619813_g3312_i0 | PRJNA986481 | 3697 | 796 | 6.619813 | 52.69371148 | Tautonia plasticadhaerens | 2527974 | Bacteria | Bacteria | 257 | 1.58e-63 | NTclustered | gi|1712713678|gb|CP036426.1| | 2527974 | g3312 | i0 | 78.88 | 3.26005025125628 | 393 | 73 | 49 | 10 | 45 | 432 | 7249034 | 7248647 | Tautonia plasticadhaerens strain ElP chromosome | blastn | 2595 | 257 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Tautonia | Tautonia plasticadhaerens | |
| 21375797 | 21375797 | PRJNA986481_P_NODE_41277_length_262_cov_0.948357_g40752_i0 | PRJNA986481 | 41277 | 262 | 0.948357 | 2.48469534 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 224 | 4.789999999999999e-54 | NTclustered | gi|2076441902|gb|CP075368.1| | 2026777 | g40752 | i0 | 82.129 | 2.95419847328244 | 263 | 45 | 100 | 2 | 1 | 262 | 2178502 | 2178763 | MAG: Phycisphaeraceae bacterium isolate ACE_PLA2 chromosome | blastn | 774 | 224 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 22650636 | 22650636 | PRJNA986481_P_NODE_35398_length_274_cov_2.160000_g34873_i0 | PRJNA986481 | 35398 | 274 | 2.16 | 5.9184 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 174 | 5.15e-39 | NTclustered | gi|2076441902|gb|CP075368.1| | 2026777 | g34873 | i0 | 83.333 | 78.6350364963504 | 198 | 23 | 70 | 10 | 22 | 213 | 2582790 | 2582983 | MAG: Phycisphaeraceae bacterium isolate ACE_PLA2 chromosome | blastn | 21546 | 174 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 23926489 | 23926489 | PRJNA986481_P_NODE_59719_length_241_cov_2.541667_g59194_i0 | PRJNA986481 | 59719 | 241 | 2.541667 | 6.12541747 | Roseimaritima multifibrata | 1930274 | Bacteria | Bacteria | 58.4 | 4.66e-4 | NTclustered | gi|1712444166|gb|CP036262.1| | 1930274 | g59194 | i0 | 100 | 3.59751037344398 | 31 | 0 | 13 | 0 | 48 | 78 | 1735176 | 1735146 | Roseimaritima multifibrata strain FF011L chromosome, complete genome | blastn | 867 | 58.4 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Roseimaritima | Roseimaritima multifibrata |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;