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contig_metadata

27 rows where analysis = "blastn", bioproject = "PRJNA986481" and tax_phylum = "Oomycota"

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tax_superkingdom 1

tax_phylum 1

  • Oomycota · 27 ✖

tax_clade 1

bioproject 1

  • PRJNA986481 · 27 ✖

analysis 1

  • blastn · 27 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
973201 973201 PRJNA986481_P_NODE_14201_length_435_cov_2.093264_g13676_i0 PRJNA986481 14201 435 2.093264 9.1056984 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 243 2.32e-59   NTclustered gi|673039884|ref|XM_008875681.1| 157072 g13676 i0 77.482 18.735632183908 413 87 94 6 23 432 450 41 Aphanomyces invadans 60S ribosomal protein mRNA blastn 8150 243 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
973968 973968 PRJNA986481_P_NODE_59901_length_241_cov_1.083333_g59376_i0 PRJNA986481 59901 241 1.083333 2.61083253 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 169 2.0599999999999997e-37   NTclustered gi|695386076|ref|XM_009520163.1| 67593 g59376 i0 81.463 21.5933609958506 205 38 85 0 3 207 1206 1002 Phytophthora sojae hypothetical protein partial mRNA blastn 5204 169 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
1272087 1272087 PRJNA986481_P_NODE_26761_length_317_cov_2.660448_g26236_i0 PRJNA986481 26761 317 2.660448 8.43362016 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 143 1.71e-29   NTclustered gi|695420150|ref|XM_009529554.1| 67593 g26236 i0 80.541 4.66246056782334 185 36 58 0 133 317 1604 1420 Phytophthora sojae hypothetical protein partial mRNA blastn 1478 143 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
2248365 2248365 PRJNA986481_P_NODE_10242_length_512_cov_12.598272_g9721_i0 PRJNA986481 10242 512 12.598272 64.50315264 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 270 1.27e-67   NTclustered gi|698807229|ref|XM_009838342.1| 112090 g9721 i0 80.108 66.064453125 372 66 71 4 136 500 438 68 Aphanomyces astaci polyubiquitin mRNA blastn 33825 270 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
2547898 2547898 PRJNA986481_P_NODE_7482_length_593_cov_2.454044_g6984_i0 PRJNA986481 7482 593 2.454044 14.55248092 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 281 6.87e-71   NTclustered gi|2795037130|ref|XM_067927279.1| 4785 g6984 i0 78.391 65.2057335581787 435 92 73 2 3 436 544 977 Phytophthora cinnamomi rRNA 2'-O-methyltransferase fibrillarin (IUM83_03289), partial mRNA blastn 38667 281 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
3523948 3523948 PRJNA986481_P_NODE_21863_length_350_cov_5.943522_g21338_i0 PRJNA986481 21863 350 5.943522 20.802327 Achlya klebsiana 4767 SAR_Eukaryotes SAR_Eukaryotes 285 2.99e-72   NTclustered gi|166303|gb|J05116.1|ACKCAL 4767 g21338 i0 86.364 66.4942857142857 264 33 75 3 1 262 698 960 A.klebsiana calmodulin gene, complete cds blastn 23273 285 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya klebsiana
4801585 4801585 PRJNA986481_P_NODE_43404_length_260_cov_0.957346_g42879_i0 PRJNA986481 43404 260 0.957346 2.4890996 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 183 8.049999999999997e-42   NTclustered gi|698810207|ref|XM_009839831.1| 112090 g42879 i0 80.408 0.942307692307692 245 44 93 2 18 260 1685 1443 Aphanomyces astaci hypothetical protein mRNA blastn 245 183 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
4801857 4801857 PRJNA986481_P_NODE_6044_length_651_cov_4.312292_g5577_i0 PRJNA986481 6044 651 4.312292 28.07302092 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 433 1.98e-116   NTclustered gi|145932329|ref|NC_009385.1| 67593 g5577 i0 79.642 92.542242703533 614 115 94 10 2 611 19797 19190 Phytophthora sojae mitochondrion, complete genome blastn 60245 433 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
5100331 5100331 PRJNA986481_P_NODE_25804_length_323_cov_1.843066_g25279_i0 PRJNA986481 25804 323 1.843066 5.95310318 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 315 3.5000000000000003e-81   NTclustered gi|2314988701|ref|NC_067067.1| 295481 g25279 i0 84.308 100.080495356037 325 47 100 2 1 323 9968 10290 Phytophthora hedraiandra voucher CBS111725 mitochondrion, complete genome blastn 32326 315 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora hedraiandra
11177249 11177249 PRJNA986481_P_NODE_55289_length_246_cov_1.365482_g54764_i0 PRJNA986481 55289 246 1.365482 3.35908572 Saprolegnia parasitica 101203 SAR_Eukaryotes SAR_Eukaryotes 206 1.61e-48   NTclustered gi|813177544|ref|XM_012349852.1| 695850 g54764 i0 83.871 18.3455284552846 217 33 88 2 1 216 895 1110 Saprolegnia parasitica CBS 223.65 hypothetical protein mRNA blastn 4513 206 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
12452867 12452867 PRJNA986481_P_NODE_40350_length_263_cov_1.084112_g39825_i0 PRJNA986481 40350 263 1.084112 2.85121456 Saprolegnia diclina 112098 SAR_Eukaryotes SAR_Eukaryotes 104 6.54e-18   NTclustered gi|669143973|ref|XM_008609327.1| 1156394 g39825 i0 86.316 0.509505703422053 95 13 36 0 148 242 400 306 Saprolegnia diclina VS20 50S ribosomal protein L21e mRNA blastn 134 104 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
13727149 13727149 PRJNA986481_P_NODE_33991_length_280_cov_2.186147_g33466_i0 PRJNA986481 33991 280 2.186147 6.1212116 Achlya bisexualis 4766 SAR_Eukaryotes SAR_Eukaryotes 261 3.94e-65   NTclustered gi|2289|emb|X59936.1| 4766 g33466 i0 87.013 79.6035714285714 231 30 83 0 1 231 231 1 A.bisexualis gene for actin blastn 22289 261 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya bisexualis
16574753 16574753 PRJNA986481_P_NODE_8213_length_568_cov_2.127168_g7706_i0 PRJNA986481 8213 568 2.127168 12.08231424 Albugo 65356 SAR_Eukaryotes SAR_Eukaryotes 73.1 4.3e-8   NTclustered gi|325183295|emb|FR824085.1| 890382 g7706 i0 92.157 0.463028169014085 51 4 10 0 340 390 34707 34757 Albugo laibachii Nc14, genomic contig CONTIG_40_NC14_v4_133649_231 blastn 263 73.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
17551135 17551135 PRJNA986481_P_NODE_15074_length_422_cov_3.718499_g14549_i0 PRJNA986481 15074 422 3.718499 15.69206578 Saprolegnia diclina 112098 SAR_Eukaryotes SAR_Eukaryotes 113 1.84e-20   NTclustered gi|669145241|ref|XM_008609961.1| 1156394 g14549 i0 81.379 14.9715639810427 145 21 34 4 54 195 311 452 Saprolegnia diclina VS20 50S ribosomal protein L22e mRNA blastn 6318 113 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
18824988 18824988 PRJNA986481_P_NODE_14335_length_433_cov_2.351562_g13810_i0 PRJNA986481 14335 433 2.351562 10.18226346 Phytophthora nicotianae 4792 SAR_Eukaryotes SAR_Eukaryotes 100 1.47e-16   NTclustered gi|675165376|ref|XM_008893325.1| 761204 g13810 i0 95.312 11.8129330254042 64 1 15 2 167 229 638 700 Phytophthora parasitica INRA-310 hypothetical protein mRNA blastn 5115 100 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae
18825230 18825230 PRJNA986481_P_NODE_29415_length_302_cov_1.533597_g28890_i0 PRJNA986481 29415 302 1.533597 4.63146294 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 292 1.52e-74   NTclustered gi|2795016949|ref|XM_067930458.1| 4785 g28890 i0 84.106 70.5662251655629 302 48 100 0 1 302 845 544 Phytophthora cinnamomi protein transporter Sec61 subunit alpha isoform 2 (IUM83_06269), partial mRNA blastn 21311 292 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
18825265 18825265 PRJNA986481_P_NODE_31275_length_292_cov_2.078189_g30750_i0 PRJNA986481 31275 292 2.078189 6.06831188 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 180 1.19e-40   NTclustered gi|2795036376|ref|XM_067936376.1| 4785 g30750 i0 80.165 14.4828767123288 242 46 83 2 19 259 430 190 Phytophthora cinnamomi 40S ribosomal protein S16 (IUM83_11796), partial mRNA blastn 4229 180 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
18825709 18825709 PRJNA986481_P_NODE_59255_length_242_cov_1.046632_g58730_i0 PRJNA986481 59255 242 1.046632 2.53284944 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 442 1.1099999999999995e-119   NTclustered gi|2795046537|ref|XM_067942568.1| 4785 g58730 i0 99.587 4.85537190082645 242 1 100 0 1 242 801 560 Phytophthora cinnamomi NPP1 protein (IUM83_17606), partial mRNA blastn 1175 442 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
18825777 18825777 PRJNA986481_P_NODE_6795_length_620_cov_2.753065_g6314_i0 PRJNA986481 6795 620 2.753065 17.069003 Phytophthora ramorum 164328 SAR_Eukaryotes SAR_Eukaryotes 283 2e-71   NTclustered gi|2794877204|ref|XM_067892388.1| 164328 g6314 i0 80.052 7.66290322580645 386 73 62 4 90 473 447 64 Phytophthora ramorum 40S ribosomal protein S14 (KRP23_72), partial mRNA blastn 4751 283 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora ramorum
19123407 19123407 PRJNA986481_P_NODE_30455_length_296_cov_1.975709_g29930_i0 PRJNA986481 30455 296 1.975709 5.84809864 Albugo 65356 SAR_Eukaryotes SAR_Eukaryotes 58.4 5.91e-4   NTclustered gi|325186370|emb|FR824151.1| 890382 g29930 i0 94.595 0.25 37 2 13 0 244 280 17703 17739 Albugo laibachii Nc14, genomic contig CONTIG_106_NC14_v4_77683_243 blastn 74 58.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
20099909 20099909 PRJNA986481_P_NODE_26656_length_318_cov_1.539033_g26131_i0 PRJNA986481 26656 318 1.539033 4.89412494 Phytophthora humicola 129352 SAR_Eukaryotes SAR_Eukaryotes 191 6.05e-44   NTclustered gi|2314988859|ref|NC_067071.1| 129352 g26131 i0 80.859 19.8018867924528 256 37 79 10 1 250 11025 10776 Phytophthora humicola voucher P3826 mitochondrion, complete genome blastn 6297 191 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora humicola
21375482 21375482 PRJNA986481_P_NODE_20797_length_359_cov_3.409677_g20272_i0 PRJNA986481 20797 359 3.409677 12.24074043 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 119 3.3100000000000003e-22   NTclustered gi|2795045055|ref|XM_067937582.1| 4785 g20272 i0 91.011 22.7576601671309 89 6 25 2 113 200 226 313 Phytophthora cinnamomi ribosomal protein L34 (IUM83_12935), partial mRNA blastn 8170 119 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
21376180 21376180 PRJNA986481_P_NODE_8217_length_567_cov_41.094595_g7710_i0 PRJNA986481 8217 567 41.094595 233.00635365 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 243 3.09e-59   NTclustered gi|673019759|ref|XM_008865619.1| 157072 g7710 i0 79.05 16.9559082892416 358 71 63 4 82 437 127 482 Aphanomyces invadans 40S ribosomal protein S23 mRNA blastn 9614 243 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
21674395 21674395 PRJNA986481_P_NODE_19337_length_372_cov_2.566563_g18812_i0 PRJNA986481 19337 372 2.566563 9.54761436 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 156 2.62e-33   NTclustered gi|301119740|ref|XM_002907552.1| 403677 g18812 i0 78.75 47.5188172043011 240 45 64 5 67 303 219 455 Phytophthora infestans T30-4 60S ribosomal protein L23a (PITG_02694), mRNA blastn 17677 156 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
22650761 22650761 PRJNA986481_P_NODE_43038_length_260_cov_0.957346_g42513_i0 PRJNA986481 43038 260 0.957346 2.4890996 Saprolegnia diclina 112098 SAR_Eukaryotes SAR_Eukaryotes 259 1.3e-64   NTclustered gi|669159445|ref|XM_008617063.1| 1156394 g42513 i0 85.6 78.9076923076923 250 33 95 3 8 255 1140 1388 Saprolegnia diclina VS20 chaperone dnaK mRNA blastn 20516 259 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
22651125 22651125 PRJNA986481_P_NODE_9318_length_535_cov_1.880658_g8800_i0 PRJNA986481 9318 535 1.880658 10.0615203 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 263 2.23e-65   NTclustered gi|695434305|ref|XM_009533098.1| 67593 g8800 i0 80.27 60.3214953271028 370 55 67 14 13 373 1100 1460 Phytophthora sojae hypothetical protein partial mRNA blastn 32272 263 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
25199433 25199433 PRJNA986481_P_NODE_14880_length_425_cov_1.763298_g14355_i0 PRJNA986481 14880 425 1.763298 7.4940165 Phytophthora nicotianae 4792 SAR_Eukaryotes SAR_Eukaryotes 377 5.95e-100   NTclustered gi|675199806|ref|XM_008910540.1| 761204 g14355 i0 84.84 86.7811764705882 376 55 88 2 45 419 129 503 Phytophthora parasitica INRA-310 calmodulin mRNA blastn 36882 377 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;