RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA986481" and tax_phylum = "Negarnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA986481 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7351269 7351269 PRJNA986481_P_NODE_29466_length_301_cov_1387.654762_g28941_i0 PRJNA986481 29466 301 1387.654762 4176.84083362 Lycium betacytorhabdovirus 1 3078349 Viruses Viruses 130 1.26e-25   NTclustered gi|2618835662|tpg|BK064324.1| 3078349 g28941 i0 100 4.41196013289037 70 0 51 0 124 193 71 2 TPA_asm: Lycium betacytorhabdovirus 1 cRNA sequence blastn 1328 130 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Lycium betacytorhabdovirus 1
9901637 9901637 PRJNA986481_P_NODE_29108_length_303_cov_1448.456693_g28583_i0 PRJNA986481 29108 303 1448.456693 4388.82377979 Lycium betacytorhabdovirus 1 3078349 Viruses Viruses 130 1.27e-25   NTclustered gi|2618835662|tpg|BK064324.1| 3078349 g28583 i0 100 7.22772277227723 70 0 41 0 109 178 2 71 TPA_asm: Lycium betacytorhabdovirus 1 cRNA sequence blastn 2190 130 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Lycium betacytorhabdovirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;