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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA986481" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA986481 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16276538 16276538 PRJNA986481_P_NODE_41153_length_262_cov_0.948357_g40628_i0 PRJNA986481 41153 262 0.948357 2.48469534 Asterias rubens 7604 Echinodermata other_Eukaryota 213 1.04e-50   NTclustered gi|1834291358|ref|XM_033783991.1| 7604 g40628 i0 84.234 78.1717557251908 222 32 85 2 28 249 1658 1876 PREDICTED: Asterias rubens uncharacterized LOC117300260 (LOC117300260), mRNA blastn 20481 213 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
21375550 21375550 PRJNA986481_P_NODE_25197_length_327_cov_1.539568_g24672_i0 PRJNA986481 25197 327 1.539568 5.03438736 Patiria miniata 46514 Echinodermata other_Eukaryota 69.4 3.05e-7   NTclustered gi|1944819460|ref|XM_038194088.1| 46514 g24672 i0 87.931 0.807339449541284 58 7 18 0 268 325 1302 1245 PREDICTED: Patiria miniata nucleosome assembly protein 1-like 1 (LOC119723430), transcript variant X2, mRNA blastn 264 69.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
22650825 22650825 PRJNA986481_P_NODE_46378_length_256_cov_1.004831_g45853_i0 PRJNA986481 46378 256 1.004831 2.57236736 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 56.5 0.002   NTclustered gi|2037971383|ref|XM_041597947.1| 7654 g45853 i0 97.059 0.265625 34 0 13 1 135 168 2623 2655 PREDICTED: Lytechinus variegatus tonsoku-like protein (LOC121407040), transcript variant X2, mRNA blastn 68 56.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
25199363 25199363 PRJNA986481_P_NODE_10680_length_501_cov_3.349558_g10159_i0 PRJNA986481 10680 501 3.349558 16.78128558 Psammechinus miliaris 7660 Echinodermata other_Eukaryota 200 1.6499999999999999e-46   NTclustered gi|1036032539|gb|AH001093.2| 7660 g10159 i0 79.322 30.3812375249501 295 53 58 8 103 393 527 817 Psammechinus miliaris histone H2B-2.1 and histone H2A-2.1 genes, complete cds blastn 15221 200 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Parechinidae Psammechinus Psammechinus miliaris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;